Gene : Eucgr.C03003 E. grandis v2.0
Defline:  (1 of 10) PF07797 - Protein of unknown function (DUF1639) (DUF1639) Genomic Order:  2447
Name:  ? Eucgr.C03003 Secondary Identifier:  ? PAC:32038255
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03003 0.5kb upstream 0.5kb upstream 6694 true Chr03: 60515495-60522188 Eucalyptus grandis
Eucgr.C03003 0.5kb upstream 0.5kb upstream 500 false Chr03: 60521689-60522188 Eucalyptus grandis
Eucgr.C03003 0.5kb downstream 0.5kb downstream 6694 true Chr03: 60514995-60521688 Eucalyptus grandis
Eucgr.C03003 0.5kb downstream 0.5kb downstream 500 false Chr03: 60514995-60515494 Eucalyptus grandis
Eucgr.C03003 1.0kb upstream 1.0kb upstream 7194 true Chr03: 60515495-60522688 Eucalyptus grandis
Eucgr.C03003 1.0kb upstream 1.0kb upstream 1000 false Chr03: 60521689-60522688 Eucalyptus grandis
Eucgr.C03003 1.0kb downstream 1.0kb downstream 7194 true Chr03: 60514495-60521688 Eucalyptus grandis
Eucgr.C03003 1.0kb downstream 1.0kb downstream 1000 false Chr03: 60514495-60515494 Eucalyptus grandis
Eucgr.C03003 2.0kb upstream 2.0kb upstream 8194 true Chr03: 60515495-60523688 Eucalyptus grandis
Eucgr.C03003 2.0kb upstream 2.0kb upstream 2000 false Chr03: 60521689-60523688 Eucalyptus grandis
Eucgr.C03003 2.0kb downstream 2.0kb downstream 8194 true Chr03: 60513495-60521688 Eucalyptus grandis
Eucgr.C03003 2.0kb downstream 2.0kb downstream 2000 false Chr03: 60513495-60515494 Eucalyptus grandis
Eucgr.C03003 5.0kb upstream 5.0kb upstream 11194 true Chr03: 60515495-60526688 Eucalyptus grandis
Eucgr.C03003 5.0kb upstream 5.0kb upstream 5000 false Chr03: 60521689-60526688 Eucalyptus grandis
Eucgr.C03003 5.0kb downstream 5.0kb downstream 11194 true Chr03: 60510495-60521688 Eucalyptus grandis
Eucgr.C03003 5.0kb downstream 5.0kb downstream 5000 false Chr03: 60510495-60515494 Eucalyptus grandis
Eucgr.C03003 10.0kb upstream 10.0kb upstream 16194 true Chr03: 60515495-60531688 Eucalyptus grandis
Eucgr.C03003 10.0kb upstream 10.0kb upstream 10000 false Chr03: 60521689-60531688 Eucalyptus grandis
Eucgr.C03003 10.0kb downstream 10.0kb downstream 16194 true Chr03: 60505495-60521688 Eucalyptus grandis
Eucgr.C03003 10.0kb downstream 10.0kb downstream 10000 false Chr03: 60505495-60515494 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068290 5270 Rosid View MSA
123746076 5271 Pentapetalae View MSA
122796883 5272 Eudicot View MSA
122049023 5273 Angiosperm View MSA
121351496 5274 Embryophyte View MSA
123382191 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.5001 0.0 28.3403   Low
cufflinks 40.0975 0.0 88.7662   High
cufflinks 15.3565 0.0 34.6278    
cufflinks 20.5146 0.0 45.7576    
cufflinks 15.0014 0.0 33.7156    
cufflinks 19.7514 0.0 43.8125    

0 Strain