Gene : Eucgr.C02930 E. grandis v2.0
Defline:  (1 of 2) 1.13.11.70 - All-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase / Carotenoid cleavage dioxygenase 8 Genomic Order:  2389
Name:  ? Eucgr.C02930 Secondary Identifier:  ? PAC:32038563
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7101 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02930 0.5kb upstream 0.5kb upstream 5471 true Chr03: 58867538-58873008 Eucalyptus grandis
Eucgr.C02930 0.5kb upstream 0.5kb upstream 500 false Chr03: 58867538-58868037 Eucalyptus grandis
Eucgr.C02930 0.5kb downstream 0.5kb downstream 5471 true Chr03: 58868038-58873508 Eucalyptus grandis
Eucgr.C02930 0.5kb downstream 0.5kb downstream 500 false Chr03: 58873009-58873508 Eucalyptus grandis
Eucgr.C02930 1.0kb upstream 1.0kb upstream 5971 true Chr03: 58867038-58873008 Eucalyptus grandis
Eucgr.C02930 1.0kb upstream 1.0kb upstream 1000 false Chr03: 58867038-58868037 Eucalyptus grandis
Eucgr.C02930 1.0kb downstream 1.0kb downstream 5971 true Chr03: 58868038-58874008 Eucalyptus grandis
Eucgr.C02930 1.0kb downstream 1.0kb downstream 1000 false Chr03: 58873009-58874008 Eucalyptus grandis
Eucgr.C02930 2.0kb upstream 2.0kb upstream 6971 true Chr03: 58866038-58873008 Eucalyptus grandis
Eucgr.C02930 2.0kb upstream 2.0kb upstream 2000 false Chr03: 58866038-58868037 Eucalyptus grandis
Eucgr.C02930 2.0kb downstream 2.0kb downstream 6971 true Chr03: 58868038-58875008 Eucalyptus grandis
Eucgr.C02930 2.0kb downstream 2.0kb downstream 2000 false Chr03: 58873009-58875008 Eucalyptus grandis
Eucgr.C02930 5.0kb upstream 5.0kb upstream 9971 true Chr03: 58863038-58873008 Eucalyptus grandis
Eucgr.C02930 5.0kb upstream 5.0kb upstream 5000 false Chr03: 58863038-58868037 Eucalyptus grandis
Eucgr.C02930 5.0kb downstream 5.0kb downstream 9971 true Chr03: 58868038-58878008 Eucalyptus grandis
Eucgr.C02930 5.0kb downstream 5.0kb downstream 5000 false Chr03: 58873009-58878008 Eucalyptus grandis
Eucgr.C02930 10.0kb upstream 10.0kb upstream 14971 true Chr03: 58858038-58873008 Eucalyptus grandis
Eucgr.C02930 10.0kb upstream 10.0kb upstream 10000 false Chr03: 58858038-58868037 Eucalyptus grandis
Eucgr.C02930 10.0kb downstream 10.0kb downstream 14971 true Chr03: 58868038-58883008 Eucalyptus grandis
Eucgr.C02930 10.0kb downstream 10.0kb downstream 10000 false Chr03: 58873009-58883008 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065320 5270 Rosid View MSA
123738795 5271 Pentapetalae View MSA
122791259 5272 Eudicot View MSA
122048984 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344649 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 15.0424 0.0 34.3491    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain