Gene : Eucgr.C02819 E. grandis v2.0
Defline:  (1 of 2) PTHR12121:SF48 - CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6 Genomic Order:  2299
Name:  ? Eucgr.C02819 Secondary Identifier:  ? PAC:32038469
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02819 0.5kb upstream 0.5kb upstream 12908 true Chr03: 57289716-57302623 Eucalyptus grandis
Eucgr.C02819 0.5kb upstream 0.5kb upstream 500 false Chr03: 57302124-57302623 Eucalyptus grandis
Eucgr.C02819 0.5kb downstream 0.5kb downstream 12908 true Chr03: 57289216-57302123 Eucalyptus grandis
Eucgr.C02819 0.5kb downstream 0.5kb downstream 500 false Chr03: 57289216-57289715 Eucalyptus grandis
Eucgr.C02819 1.0kb upstream 1.0kb upstream 13408 true Chr03: 57289716-57303123 Eucalyptus grandis
Eucgr.C02819 1.0kb upstream 1.0kb upstream 1000 false Chr03: 57302124-57303123 Eucalyptus grandis
Eucgr.C02819 1.0kb downstream 1.0kb downstream 13408 true Chr03: 57288716-57302123 Eucalyptus grandis
Eucgr.C02819 1.0kb downstream 1.0kb downstream 1000 false Chr03: 57288716-57289715 Eucalyptus grandis
Eucgr.C02819 2.0kb upstream 2.0kb upstream 14408 true Chr03: 57289716-57304123 Eucalyptus grandis
Eucgr.C02819 2.0kb upstream 2.0kb upstream 2000 false Chr03: 57302124-57304123 Eucalyptus grandis
Eucgr.C02819 2.0kb downstream 2.0kb downstream 14408 true Chr03: 57287716-57302123 Eucalyptus grandis
Eucgr.C02819 2.0kb downstream 2.0kb downstream 2000 false Chr03: 57287716-57289715 Eucalyptus grandis
Eucgr.C02819 5.0kb upstream 5.0kb upstream 17408 true Chr03: 57289716-57307123 Eucalyptus grandis
Eucgr.C02819 5.0kb upstream 5.0kb upstream 5000 false Chr03: 57302124-57307123 Eucalyptus grandis
Eucgr.C02819 5.0kb downstream 5.0kb downstream 17408 true Chr03: 57284716-57302123 Eucalyptus grandis
Eucgr.C02819 5.0kb downstream 5.0kb downstream 5000 false Chr03: 57284716-57289715 Eucalyptus grandis
Eucgr.C02819 10.0kb upstream 10.0kb upstream 22408 true Chr03: 57289716-57312123 Eucalyptus grandis
Eucgr.C02819 10.0kb upstream 10.0kb upstream 10000 false Chr03: 57302124-57312123 Eucalyptus grandis
Eucgr.C02819 10.0kb downstream 10.0kb downstream 22408 true Chr03: 57279716-57302123 Eucalyptus grandis
Eucgr.C02819 10.0kb downstream 10.0kb downstream 10000 false Chr03: 57279716-57289715 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066048 5270 Rosid View MSA
123737672 5271 Pentapetalae View MSA
122788229 5272 Eudicot View MSA
122041541 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.68028 0.0 9.09439   High
cufflinks 1.742 0.0 4.59535    
cufflinks 2.71041 0.0 6.86635    
cufflinks 1.51554 0.0 4.04811   Low
cufflinks 1.88145 0.0 4.94613    
cufflinks 2.34171 0.0 6.11097    

0 Strain