Gene : Eucgr.C02735 E. grandis v2.0
Defline:  (1 of 1) KOG0027//KOG0028//KOG0034 - Calmodulin and related proteins (EF-Hand superfamily) // Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein // Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein Genomic Order:  2228
Name:  ? Eucgr.C02735 Secondary Identifier:  ? PAC:32036360
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02735 0.5kb upstream 0.5kb upstream 5889 true Chr03: 56268468-56274356 Eucalyptus grandis
Eucgr.C02735 0.5kb upstream 0.5kb upstream 500 false Chr03: 56268468-56268967 Eucalyptus grandis
Eucgr.C02735 0.5kb downstream 0.5kb downstream 5889 true Chr03: 56268968-56274856 Eucalyptus grandis
Eucgr.C02735 0.5kb downstream 0.5kb downstream 500 false Chr03: 56274357-56274856 Eucalyptus grandis
Eucgr.C02735 1.0kb upstream 1.0kb upstream 6389 true Chr03: 56267968-56274356 Eucalyptus grandis
Eucgr.C02735 1.0kb upstream 1.0kb upstream 1000 false Chr03: 56267968-56268967 Eucalyptus grandis
Eucgr.C02735 1.0kb downstream 1.0kb downstream 6389 true Chr03: 56268968-56275356 Eucalyptus grandis
Eucgr.C02735 1.0kb downstream 1.0kb downstream 1000 false Chr03: 56274357-56275356 Eucalyptus grandis
Eucgr.C02735 2.0kb upstream 2.0kb upstream 7389 true Chr03: 56266968-56274356 Eucalyptus grandis
Eucgr.C02735 2.0kb upstream 2.0kb upstream 2000 false Chr03: 56266968-56268967 Eucalyptus grandis
Eucgr.C02735 2.0kb downstream 2.0kb downstream 7389 true Chr03: 56268968-56276356 Eucalyptus grandis
Eucgr.C02735 2.0kb downstream 2.0kb downstream 2000 false Chr03: 56274357-56276356 Eucalyptus grandis
Eucgr.C02735 5.0kb upstream 5.0kb upstream 10389 true Chr03: 56263968-56274356 Eucalyptus grandis
Eucgr.C02735 5.0kb upstream 5.0kb upstream 5000 false Chr03: 56263968-56268967 Eucalyptus grandis
Eucgr.C02735 5.0kb downstream 5.0kb downstream 10389 true Chr03: 56268968-56279356 Eucalyptus grandis
Eucgr.C02735 5.0kb downstream 5.0kb downstream 5000 false Chr03: 56274357-56279356 Eucalyptus grandis
Eucgr.C02735 10.0kb upstream 10.0kb upstream 15389 true Chr03: 56258968-56274356 Eucalyptus grandis
Eucgr.C02735 10.0kb upstream 10.0kb upstream 10000 false Chr03: 56258968-56268967 Eucalyptus grandis
Eucgr.C02735 10.0kb downstream 10.0kb downstream 15389 true Chr03: 56268968-56284356 Eucalyptus grandis
Eucgr.C02735 10.0kb downstream 10.0kb downstream 10000 false Chr03: 56274357-56284356 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073183 5270 Rosid View MSA
123742641 5271 Pentapetalae View MSA
122790177 5272 Eudicot View MSA
122041646 5273 Angiosperm View MSA
121347886 5274 Embryophyte View MSA
123424828 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.1718 0.0 43.7557    
cufflinks 11.6422 0.0 27.8124    
cufflinks 14.1037 0.0 34.4119    
cufflinks 8.74449 0.0 20.3367    
cufflinks 4.65372 0.0 11.7787   Low
cufflinks 40.0496 0.0 91.0756 High High

0 Strain