Gene : Eucgr.C03721 E. grandis v2.0
Defline:  (1 of 1) PTHR31321:SF17 - PECTINESTERASE 53-RELATED Genomic Order:  3009
Name:  ? Eucgr.C03721 Secondary Identifier:  ? PAC:32039848
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-1081 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03721 0.5kb upstream 0.5kb upstream 3830 true Chr03: 75765401-75769230 Eucalyptus grandis
Eucgr.C03721 0.5kb upstream 0.5kb upstream 500 false Chr03: 75765401-75765900 Eucalyptus grandis
Eucgr.C03721 0.5kb downstream 0.5kb downstream 3830 true Chr03: 75765901-75769730 Eucalyptus grandis
Eucgr.C03721 0.5kb downstream 0.5kb downstream 500 false Chr03: 75769231-75769730 Eucalyptus grandis
Eucgr.C03721 1.0kb upstream 1.0kb upstream 4330 true Chr03: 75764901-75769230 Eucalyptus grandis
Eucgr.C03721 1.0kb upstream 1.0kb upstream 1000 false Chr03: 75764901-75765900 Eucalyptus grandis
Eucgr.C03721 1.0kb downstream 1.0kb downstream 4330 true Chr03: 75765901-75770230 Eucalyptus grandis
Eucgr.C03721 1.0kb downstream 1.0kb downstream 1000 false Chr03: 75769231-75770230 Eucalyptus grandis
Eucgr.C03721 2.0kb upstream 2.0kb upstream 5330 true Chr03: 75763901-75769230 Eucalyptus grandis
Eucgr.C03721 2.0kb upstream 2.0kb upstream 2000 false Chr03: 75763901-75765900 Eucalyptus grandis
Eucgr.C03721 2.0kb downstream 2.0kb downstream 5330 true Chr03: 75765901-75771230 Eucalyptus grandis
Eucgr.C03721 2.0kb downstream 2.0kb downstream 2000 false Chr03: 75769231-75771230 Eucalyptus grandis
Eucgr.C03721 5.0kb upstream 5.0kb upstream 8330 true Chr03: 75760901-75769230 Eucalyptus grandis
Eucgr.C03721 5.0kb upstream 5.0kb upstream 5000 false Chr03: 75760901-75765900 Eucalyptus grandis
Eucgr.C03721 5.0kb downstream 5.0kb downstream 8330 true Chr03: 75765901-75774230 Eucalyptus grandis
Eucgr.C03721 5.0kb downstream 5.0kb downstream 5000 false Chr03: 75769231-75774230 Eucalyptus grandis
Eucgr.C03721 10.0kb upstream 10.0kb upstream 13330 true Chr03: 75755901-75769230 Eucalyptus grandis
Eucgr.C03721 10.0kb upstream 10.0kb upstream 10000 false Chr03: 75755901-75765900 Eucalyptus grandis
Eucgr.C03721 10.0kb downstream 10.0kb downstream 13330 true Chr03: 75765901-75779230 Eucalyptus grandis
Eucgr.C03721 10.0kb downstream 10.0kb downstream 10000 false Chr03: 75769231-75779230 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072507 5270 Rosid View MSA
123749386 5271 Pentapetalae View MSA
122794986 5272 Eudicot View MSA
122041979 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.580272 0.0 1.87291    
cufflinks 1.22736 0.0 3.63208    
cufflinks 0.10102 0.0 0.457451 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain