Gene : Eucgr.C03525 E. grandis v2.0
Defline:  (1 of 1) PTHR23321//PTHR23321:SF33 - RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLAR Genomic Order:  2721
Name:  ? Eucgr.C03525 Secondary Identifier:  ? PAC:32037335
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis CALVIN-PWY Eucalyptus grandis pathologic  
Egrandis PHOTOALL-PWY Eucalyptus grandis pathologic  
Egrandis PWY-5723 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03525 0.5kb upstream 0.5kb upstream 1034 true Chr03: 68983529-68984562 Eucalyptus grandis
Eucgr.C03525 0.5kb upstream 0.5kb upstream 500 false Chr03: 68983529-68984028 Eucalyptus grandis
Eucgr.C03525 0.5kb downstream 0.5kb downstream 1034 true Chr03: 68984029-68985062 Eucalyptus grandis
Eucgr.C03525 0.5kb downstream 0.5kb downstream 500 false Chr03: 68984563-68985062 Eucalyptus grandis
Eucgr.C03525 1.0kb upstream 1.0kb upstream 1534 true Chr03: 68983029-68984562 Eucalyptus grandis
Eucgr.C03525 1.0kb upstream 1.0kb upstream 1000 false Chr03: 68983029-68984028 Eucalyptus grandis
Eucgr.C03525 1.0kb downstream 1.0kb downstream 1534 true Chr03: 68984029-68985562 Eucalyptus grandis
Eucgr.C03525 1.0kb downstream 1.0kb downstream 1000 false Chr03: 68984563-68985562 Eucalyptus grandis
Eucgr.C03525 2.0kb upstream 2.0kb upstream 2534 true Chr03: 68982029-68984562 Eucalyptus grandis
Eucgr.C03525 2.0kb upstream 2.0kb upstream 2000 false Chr03: 68982029-68984028 Eucalyptus grandis
Eucgr.C03525 2.0kb downstream 2.0kb downstream 2534 true Chr03: 68984029-68986562 Eucalyptus grandis
Eucgr.C03525 2.0kb downstream 2.0kb downstream 2000 false Chr03: 68984563-68986562 Eucalyptus grandis
Eucgr.C03525 5.0kb upstream 5.0kb upstream 5534 true Chr03: 68979029-68984562 Eucalyptus grandis
Eucgr.C03525 5.0kb upstream 5.0kb upstream 5000 false Chr03: 68979029-68984028 Eucalyptus grandis
Eucgr.C03525 5.0kb downstream 5.0kb downstream 5534 true Chr03: 68984029-68989562 Eucalyptus grandis
Eucgr.C03525 5.0kb downstream 5.0kb downstream 5000 false Chr03: 68984563-68989562 Eucalyptus grandis
Eucgr.C03525 10.0kb upstream 10.0kb upstream 10534 true Chr03: 68974029-68984562 Eucalyptus grandis
Eucgr.C03525 10.0kb upstream 10.0kb upstream 10000 false Chr03: 68974029-68984028 Eucalyptus grandis
Eucgr.C03525 10.0kb downstream 10.0kb downstream 10534 true Chr03: 68984029-68994562 Eucalyptus grandis
Eucgr.C03525 10.0kb downstream 10.0kb downstream 10000 false Chr03: 68984563-68994562 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050800 5270 Rosid View MSA
123751247 5271 Pentapetalae View MSA
122773961 5272 Eudicot View MSA
122051023 5273 Angiosperm View MSA
121312251 5274 Embryophyte View MSA
123428195 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 168.72 0.0 373.142 High  
cufflinks 3.67772 0.0 10.8833    
cufflinks 49.4028 0.0 114.185 High  
cufflinks 5.34844 0.0 15.2713    
cufflinks 4.01656 0.0 11.849    
cufflinks 475.304 0.0 1084.02 High High

0 Strain