Gene : Eucgr.C03535 E. grandis v2.0
Defline:  (1 of 12) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 Genomic Order:  2729
Name:  ? Eucgr.C03535 Secondary Identifier:  ? PAC:32039485
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03535 0.5kb upstream 0.5kb upstream 1467 true Chr03: 69400181-69401647 Eucalyptus grandis
Eucgr.C03535 0.5kb upstream 0.5kb upstream 500 false Chr03: 69401148-69401647 Eucalyptus grandis
Eucgr.C03535 0.5kb downstream 0.5kb downstream 1467 true Chr03: 69399681-69401147 Eucalyptus grandis
Eucgr.C03535 0.5kb downstream 0.5kb downstream 500 false Chr03: 69399681-69400180 Eucalyptus grandis
Eucgr.C03535 1.0kb upstream 1.0kb upstream 1967 true Chr03: 69400181-69402147 Eucalyptus grandis
Eucgr.C03535 1.0kb upstream 1.0kb upstream 1000 false Chr03: 69401148-69402147 Eucalyptus grandis
Eucgr.C03535 1.0kb downstream 1.0kb downstream 1967 true Chr03: 69399181-69401147 Eucalyptus grandis
Eucgr.C03535 1.0kb downstream 1.0kb downstream 1000 false Chr03: 69399181-69400180 Eucalyptus grandis
Eucgr.C03535 2.0kb upstream 2.0kb upstream 2967 true Chr03: 69400181-69403147 Eucalyptus grandis
Eucgr.C03535 2.0kb upstream 2.0kb upstream 2000 false Chr03: 69401148-69403147 Eucalyptus grandis
Eucgr.C03535 2.0kb downstream 2.0kb downstream 2967 true Chr03: 69398181-69401147 Eucalyptus grandis
Eucgr.C03535 2.0kb downstream 2.0kb downstream 2000 false Chr03: 69398181-69400180 Eucalyptus grandis
Eucgr.C03535 5.0kb upstream 5.0kb upstream 5967 true Chr03: 69400181-69406147 Eucalyptus grandis
Eucgr.C03535 5.0kb upstream 5.0kb upstream 5000 false Chr03: 69401148-69406147 Eucalyptus grandis
Eucgr.C03535 5.0kb downstream 5.0kb downstream 5967 true Chr03: 69395181-69401147 Eucalyptus grandis
Eucgr.C03535 5.0kb downstream 5.0kb downstream 5000 false Chr03: 69395181-69400180 Eucalyptus grandis
Eucgr.C03535 10.0kb upstream 10.0kb upstream 10967 true Chr03: 69400181-69411147 Eucalyptus grandis
Eucgr.C03535 10.0kb upstream 10.0kb upstream 10000 false Chr03: 69401148-69411147 Eucalyptus grandis
Eucgr.C03535 10.0kb downstream 10.0kb downstream 10967 true Chr03: 69390181-69401147 Eucalyptus grandis
Eucgr.C03535 10.0kb downstream 10.0kb downstream 10000 false Chr03: 69390181-69400180 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066370 5270 Rosid View MSA
123751196 5271 Pentapetalae View MSA
122788614 5272 Eudicot View MSA
122044188 5273 Angiosperm View MSA
121352324 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.0389 0.0 8.66103    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00316728 0.0 0.0877547 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 7.16392 0.0 18.6967    

0 Strain