Gene : Eucgr.C03473 E. grandis v2.0
Defline:  (1 of 2) PTHR12919 - 30S RIBOSOMAL PROTEIN S16 Genomic Order:  2879
Name:  ? Eucgr.C03473 Secondary Identifier:  ? PAC:32038992
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03473 0.5kb upstream 0.5kb upstream 3487 true Chr03: 72799177-72802663 Eucalyptus grandis
Eucgr.C03473 0.5kb upstream 0.5kb upstream 500 false Chr03: 72799177-72799676 Eucalyptus grandis
Eucgr.C03473 0.5kb downstream 0.5kb downstream 3487 true Chr03: 72799677-72803163 Eucalyptus grandis
Eucgr.C03473 0.5kb downstream 0.5kb downstream 500 false Chr03: 72802664-72803163 Eucalyptus grandis
Eucgr.C03473 1.0kb upstream 1.0kb upstream 3987 true Chr03: 72798677-72802663 Eucalyptus grandis
Eucgr.C03473 1.0kb upstream 1.0kb upstream 1000 false Chr03: 72798677-72799676 Eucalyptus grandis
Eucgr.C03473 1.0kb downstream 1.0kb downstream 3987 true Chr03: 72799677-72803663 Eucalyptus grandis
Eucgr.C03473 1.0kb downstream 1.0kb downstream 1000 false Chr03: 72802664-72803663 Eucalyptus grandis
Eucgr.C03473 2.0kb upstream 2.0kb upstream 4987 true Chr03: 72797677-72802663 Eucalyptus grandis
Eucgr.C03473 2.0kb upstream 2.0kb upstream 2000 false Chr03: 72797677-72799676 Eucalyptus grandis
Eucgr.C03473 2.0kb downstream 2.0kb downstream 4987 true Chr03: 72799677-72804663 Eucalyptus grandis
Eucgr.C03473 2.0kb downstream 2.0kb downstream 2000 false Chr03: 72802664-72804663 Eucalyptus grandis
Eucgr.C03473 5.0kb upstream 5.0kb upstream 7987 true Chr03: 72794677-72802663 Eucalyptus grandis
Eucgr.C03473 5.0kb upstream 5.0kb upstream 5000 false Chr03: 72794677-72799676 Eucalyptus grandis
Eucgr.C03473 5.0kb downstream 5.0kb downstream 7987 true Chr03: 72799677-72807663 Eucalyptus grandis
Eucgr.C03473 5.0kb downstream 5.0kb downstream 5000 false Chr03: 72802664-72807663 Eucalyptus grandis
Eucgr.C03473 10.0kb upstream 10.0kb upstream 12987 true Chr03: 72789677-72802663 Eucalyptus grandis
Eucgr.C03473 10.0kb upstream 10.0kb upstream 10000 false Chr03: 72789677-72799676 Eucalyptus grandis
Eucgr.C03473 10.0kb downstream 10.0kb downstream 12987 true Chr03: 72799677-72812663 Eucalyptus grandis
Eucgr.C03473 10.0kb downstream 10.0kb downstream 10000 false Chr03: 72802664-72812663 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065829 5270 Rosid View MSA
123738502 5271 Pentapetalae View MSA
122792819 5272 Eudicot View MSA
122051162 5273 Angiosperm View MSA
121348917 5274 Embryophyte View MSA
123426601 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.368 0.0 29.7985    
cufflinks 7.02981 0.0 18.0622   Low
cufflinks 13.3787 0.0 32.2775    
cufflinks 14.3831 0.0 34.5044    
cufflinks 20.763 0.0 48.002   High
cufflinks 6.05211 0.0 15.6111   Low

0 Strain