Gene : Eucgr.C03422 E. grandis v2.0
Defline:  (1 of 1) PTHR13107 - KARYOGAMY PROTEIN KAR4-RELATED Genomic Order:  2848
Name:  ? Eucgr.C03422 Secondary Identifier:  ? PAC:32039124
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03422 0.5kb upstream 0.5kb upstream 7584 true Chr03: 72142021-72149604 Eucalyptus grandis
Eucgr.C03422 0.5kb upstream 0.5kb upstream 500 false Chr03: 72149105-72149604 Eucalyptus grandis
Eucgr.C03422 0.5kb downstream 0.5kb downstream 7584 true Chr03: 72141521-72149104 Eucalyptus grandis
Eucgr.C03422 0.5kb downstream 0.5kb downstream 500 false Chr03: 72141521-72142020 Eucalyptus grandis
Eucgr.C03422 1.0kb upstream 1.0kb upstream 8084 true Chr03: 72142021-72150104 Eucalyptus grandis
Eucgr.C03422 1.0kb upstream 1.0kb upstream 1000 false Chr03: 72149105-72150104 Eucalyptus grandis
Eucgr.C03422 1.0kb downstream 1.0kb downstream 8084 true Chr03: 72141021-72149104 Eucalyptus grandis
Eucgr.C03422 1.0kb downstream 1.0kb downstream 1000 false Chr03: 72141021-72142020 Eucalyptus grandis
Eucgr.C03422 2.0kb upstream 2.0kb upstream 9084 true Chr03: 72142021-72151104 Eucalyptus grandis
Eucgr.C03422 2.0kb upstream 2.0kb upstream 2000 false Chr03: 72149105-72151104 Eucalyptus grandis
Eucgr.C03422 2.0kb downstream 2.0kb downstream 9084 true Chr03: 72140021-72149104 Eucalyptus grandis
Eucgr.C03422 2.0kb downstream 2.0kb downstream 2000 false Chr03: 72140021-72142020 Eucalyptus grandis
Eucgr.C03422 5.0kb upstream 5.0kb upstream 12084 true Chr03: 72142021-72154104 Eucalyptus grandis
Eucgr.C03422 5.0kb upstream 5.0kb upstream 5000 false Chr03: 72149105-72154104 Eucalyptus grandis
Eucgr.C03422 5.0kb downstream 5.0kb downstream 12084 true Chr03: 72137021-72149104 Eucalyptus grandis
Eucgr.C03422 5.0kb downstream 5.0kb downstream 5000 false Chr03: 72137021-72142020 Eucalyptus grandis
Eucgr.C03422 10.0kb upstream 10.0kb upstream 17084 true Chr03: 72142021-72159104 Eucalyptus grandis
Eucgr.C03422 10.0kb upstream 10.0kb upstream 10000 false Chr03: 72149105-72159104 Eucalyptus grandis
Eucgr.C03422 10.0kb downstream 10.0kb downstream 17084 true Chr03: 72132021-72149104 Eucalyptus grandis
Eucgr.C03422 10.0kb downstream 10.0kb downstream 10000 false Chr03: 72132021-72142020 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068937 5270 Rosid View MSA
123737308 5271 Pentapetalae View MSA
122789765 5272 Eudicot View MSA
122041791 5273 Angiosperm View MSA
121349708 5274 Embryophyte View MSA
123428450 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.2355 0.0 33.6681    
cufflinks 10.4167 0.0 23.4381    
cufflinks 13.7688 0.0 34.4981   High
cufflinks 10.1185 0.0 22.7963    
cufflinks 7.42406 0.0 18.4499   Low
cufflinks 10.8306 0.0 24.3984    

0 Strain