Gene : Eucgr.C03305 E. grandis v2.0
Defline:  (1 of 2) PF06172 - Cupin superfamily (DUF985) (Cupin_5) Genomic Order:  2651
Name:  ? Eucgr.C03305 Secondary Identifier:  ? PAC:32036947
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03305 0.5kb upstream 0.5kb upstream 2699 true Chr03: 65910566-65913264 Eucalyptus grandis
Eucgr.C03305 0.5kb upstream 0.5kb upstream 500 false Chr03: 65912765-65913264 Eucalyptus grandis
Eucgr.C03305 0.5kb downstream 0.5kb downstream 2699 true Chr03: 65910066-65912764 Eucalyptus grandis
Eucgr.C03305 0.5kb downstream 0.5kb downstream 500 false Chr03: 65910066-65910565 Eucalyptus grandis
Eucgr.C03305 1.0kb upstream 1.0kb upstream 3199 true Chr03: 65910566-65913764 Eucalyptus grandis
Eucgr.C03305 1.0kb upstream 1.0kb upstream 1000 false Chr03: 65912765-65913764 Eucalyptus grandis
Eucgr.C03305 1.0kb downstream 1.0kb downstream 3199 true Chr03: 65909566-65912764 Eucalyptus grandis
Eucgr.C03305 1.0kb downstream 1.0kb downstream 1000 false Chr03: 65909566-65910565 Eucalyptus grandis
Eucgr.C03305 2.0kb upstream 2.0kb upstream 4199 true Chr03: 65910566-65914764 Eucalyptus grandis
Eucgr.C03305 2.0kb upstream 2.0kb upstream 2000 false Chr03: 65912765-65914764 Eucalyptus grandis
Eucgr.C03305 2.0kb downstream 2.0kb downstream 4199 true Chr03: 65908566-65912764 Eucalyptus grandis
Eucgr.C03305 2.0kb downstream 2.0kb downstream 2000 false Chr03: 65908566-65910565 Eucalyptus grandis
Eucgr.C03305 5.0kb upstream 5.0kb upstream 7199 true Chr03: 65910566-65917764 Eucalyptus grandis
Eucgr.C03305 5.0kb upstream 5.0kb upstream 5000 false Chr03: 65912765-65917764 Eucalyptus grandis
Eucgr.C03305 5.0kb downstream 5.0kb downstream 7199 true Chr03: 65905566-65912764 Eucalyptus grandis
Eucgr.C03305 5.0kb downstream 5.0kb downstream 5000 false Chr03: 65905566-65910565 Eucalyptus grandis
Eucgr.C03305 10.0kb upstream 10.0kb upstream 12199 true Chr03: 65910566-65922764 Eucalyptus grandis
Eucgr.C03305 10.0kb upstream 10.0kb upstream 10000 false Chr03: 65912765-65922764 Eucalyptus grandis
Eucgr.C03305 10.0kb downstream 10.0kb downstream 12199 true Chr03: 65900566-65912764 Eucalyptus grandis
Eucgr.C03305 10.0kb downstream 10.0kb downstream 10000 false Chr03: 65900566-65910565 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063762 5270 Rosid View MSA
123736862 5271 Pentapetalae View MSA
122786910 5272 Eudicot View MSA
122051010 5273 Angiosperm View MSA
121346638 5274 Embryophyte View MSA
123426052 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.9055 0.0 69.3692   High
cufflinks 12.9732 0.0 30.1225   Low
cufflinks 18.3343 0.0 42.5409    
cufflinks 18.7696 0.0 43.9172    
cufflinks 12.8337 0.0 29.7538   Low
cufflinks 23.3978 0.0 54.1376    

0 Strain