Gene : Eucgr.C03183 E. grandis v2.0
Defline:  (1 of 1) 1.5.1.8 - Saccharopine dehydrogenase (NADP(+), L-lysine-forming) / Lysine-ketoglutarate reductase Genomic Order:  2582
Name:  ? Eucgr.C03183 Secondary Identifier:  ? PAC:32037772
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis LYSINE-DEG1-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03183 0.5kb upstream 0.5kb upstream 10219 true Chr03: 64181519-64191737 Eucalyptus grandis
Eucgr.C03183 0.5kb upstream 0.5kb upstream 500 false Chr03: 64191238-64191737 Eucalyptus grandis
Eucgr.C03183 0.5kb downstream 0.5kb downstream 10219 true Chr03: 64181019-64191237 Eucalyptus grandis
Eucgr.C03183 0.5kb downstream 0.5kb downstream 500 false Chr03: 64181019-64181518 Eucalyptus grandis
Eucgr.C03183 1.0kb upstream 1.0kb upstream 10719 true Chr03: 64181519-64192237 Eucalyptus grandis
Eucgr.C03183 1.0kb upstream 1.0kb upstream 1000 false Chr03: 64191238-64192237 Eucalyptus grandis
Eucgr.C03183 1.0kb downstream 1.0kb downstream 10719 true Chr03: 64180519-64191237 Eucalyptus grandis
Eucgr.C03183 1.0kb downstream 1.0kb downstream 1000 false Chr03: 64180519-64181518 Eucalyptus grandis
Eucgr.C03183 2.0kb upstream 2.0kb upstream 11719 true Chr03: 64181519-64193237 Eucalyptus grandis
Eucgr.C03183 2.0kb upstream 2.0kb upstream 2000 false Chr03: 64191238-64193237 Eucalyptus grandis
Eucgr.C03183 2.0kb downstream 2.0kb downstream 11719 true Chr03: 64179519-64191237 Eucalyptus grandis
Eucgr.C03183 2.0kb downstream 2.0kb downstream 2000 false Chr03: 64179519-64181518 Eucalyptus grandis
Eucgr.C03183 5.0kb upstream 5.0kb upstream 14719 true Chr03: 64181519-64196237 Eucalyptus grandis
Eucgr.C03183 5.0kb upstream 5.0kb upstream 5000 false Chr03: 64191238-64196237 Eucalyptus grandis
Eucgr.C03183 5.0kb downstream 5.0kb downstream 14719 true Chr03: 64176519-64191237 Eucalyptus grandis
Eucgr.C03183 5.0kb downstream 5.0kb downstream 5000 false Chr03: 64176519-64181518 Eucalyptus grandis
Eucgr.C03183 10.0kb upstream 10.0kb upstream 19719 true Chr03: 64181519-64201237 Eucalyptus grandis
Eucgr.C03183 10.0kb upstream 10.0kb upstream 10000 false Chr03: 64191238-64201237 Eucalyptus grandis
Eucgr.C03183 10.0kb downstream 10.0kb downstream 19719 true Chr03: 64171519-64191237 Eucalyptus grandis
Eucgr.C03183 10.0kb downstream 10.0kb downstream 10000 false Chr03: 64171519-64181518 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068901 5270 Rosid View MSA
123736723 5271 Pentapetalae View MSA
122787907 5272 Eudicot View MSA
122047432 5273 Angiosperm View MSA
121344808 5274 Embryophyte View MSA
123380103 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.29432 0.0 10.932    
cufflinks 12.8745 0.0 29.0119   High
cufflinks 5.66726 0.0 13.1737    
cufflinks 10.9311 0.0 24.5166   High
cufflinks 5.39386 0.0 12.6306    
cufflinks 3.22652 0.0 7.64386   Low

0 Strain