Gene : Eucgr.C03194 E. grandis v2.0
Defline:  (1 of 1) PTHR15629:SF2 - SH3 DOMAIN-CONTAINING YSC84-LIKE PROTEIN 1 Genomic Order:  2590
Name:  ? Eucgr.C03194 Secondary Identifier:  ? PAC:32037344
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03194 0.5kb upstream 0.5kb upstream 4772 true Chr03: 64288940-64293711 Eucalyptus grandis
Eucgr.C03194 0.5kb upstream 0.5kb upstream 500 false Chr03: 64293212-64293711 Eucalyptus grandis
Eucgr.C03194 0.5kb downstream 0.5kb downstream 4772 true Chr03: 64288440-64293211 Eucalyptus grandis
Eucgr.C03194 0.5kb downstream 0.5kb downstream 500 false Chr03: 64288440-64288939 Eucalyptus grandis
Eucgr.C03194 1.0kb upstream 1.0kb upstream 5272 true Chr03: 64288940-64294211 Eucalyptus grandis
Eucgr.C03194 1.0kb upstream 1.0kb upstream 1000 false Chr03: 64293212-64294211 Eucalyptus grandis
Eucgr.C03194 1.0kb downstream 1.0kb downstream 5272 true Chr03: 64287940-64293211 Eucalyptus grandis
Eucgr.C03194 1.0kb downstream 1.0kb downstream 1000 false Chr03: 64287940-64288939 Eucalyptus grandis
Eucgr.C03194 2.0kb upstream 2.0kb upstream 6272 true Chr03: 64288940-64295211 Eucalyptus grandis
Eucgr.C03194 2.0kb upstream 2.0kb upstream 2000 false Chr03: 64293212-64295211 Eucalyptus grandis
Eucgr.C03194 2.0kb downstream 2.0kb downstream 6272 true Chr03: 64286940-64293211 Eucalyptus grandis
Eucgr.C03194 2.0kb downstream 2.0kb downstream 2000 false Chr03: 64286940-64288939 Eucalyptus grandis
Eucgr.C03194 5.0kb upstream 5.0kb upstream 9272 true Chr03: 64288940-64298211 Eucalyptus grandis
Eucgr.C03194 5.0kb upstream 5.0kb upstream 5000 false Chr03: 64293212-64298211 Eucalyptus grandis
Eucgr.C03194 5.0kb downstream 5.0kb downstream 9272 true Chr03: 64283940-64293211 Eucalyptus grandis
Eucgr.C03194 5.0kb downstream 5.0kb downstream 5000 false Chr03: 64283940-64288939 Eucalyptus grandis
Eucgr.C03194 10.0kb upstream 10.0kb upstream 14272 true Chr03: 64288940-64303211 Eucalyptus grandis
Eucgr.C03194 10.0kb upstream 10.0kb upstream 10000 false Chr03: 64293212-64303211 Eucalyptus grandis
Eucgr.C03194 10.0kb downstream 10.0kb downstream 14272 true Chr03: 64278940-64293211 Eucalyptus grandis
Eucgr.C03194 10.0kb downstream 10.0kb downstream 10000 false Chr03: 64278940-64288939 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061750 5270 Rosid View MSA
123737814 5271 Pentapetalae View MSA
122792588 5272 Eudicot View MSA
122046278 5273 Angiosperm View MSA
121345874 5274 Embryophyte View MSA
123426176 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.4736 0.0 52.7419    
cufflinks 17.5921 0.0 43.5115    
cufflinks 21.9601 0.0 49.5512    
cufflinks 16.649 0.0 37.3807    
cufflinks 12.0301 0.0 27.5943   Low
cufflinks 25.8394 0.0 58.3412   High

0 Strain