Gene : Eucgr.C04195 E. grandis v2.0
Defline:  (1 of 2) PTHR23105//PTHR23105:SF49 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER Genomic Order:  3220
Name:  ? Eucgr.C04195 Secondary Identifier:  ? PAC:32036772
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C04195 0.5kb upstream 0.5kb upstream 4077 true Chr03: 79089228-79093304 Eucalyptus grandis
Eucgr.C04195 0.5kb upstream 0.5kb upstream 500 false Chr03: 79089228-79089727 Eucalyptus grandis
Eucgr.C04195 0.5kb downstream 0.5kb downstream 4077 true Chr03: 79089728-79093804 Eucalyptus grandis
Eucgr.C04195 0.5kb downstream 0.5kb downstream 500 false Chr03: 79093305-79093804 Eucalyptus grandis
Eucgr.C04195 1.0kb upstream 1.0kb upstream 4577 true Chr03: 79088728-79093304 Eucalyptus grandis
Eucgr.C04195 1.0kb upstream 1.0kb upstream 1000 false Chr03: 79088728-79089727 Eucalyptus grandis
Eucgr.C04195 1.0kb downstream 1.0kb downstream 4577 true Chr03: 79089728-79094304 Eucalyptus grandis
Eucgr.C04195 1.0kb downstream 1.0kb downstream 1000 false Chr03: 79093305-79094304 Eucalyptus grandis
Eucgr.C04195 2.0kb upstream 2.0kb upstream 5577 true Chr03: 79087728-79093304 Eucalyptus grandis
Eucgr.C04195 2.0kb upstream 2.0kb upstream 2000 false Chr03: 79087728-79089727 Eucalyptus grandis
Eucgr.C04195 2.0kb downstream 2.0kb downstream 5577 true Chr03: 79089728-79095304 Eucalyptus grandis
Eucgr.C04195 2.0kb downstream 2.0kb downstream 2000 false Chr03: 79093305-79095304 Eucalyptus grandis
Eucgr.C04195 5.0kb upstream 5.0kb upstream 8577 true Chr03: 79084728-79093304 Eucalyptus grandis
Eucgr.C04195 5.0kb upstream 5.0kb upstream 5000 false Chr03: 79084728-79089727 Eucalyptus grandis
Eucgr.C04195 5.0kb downstream 5.0kb downstream 8577 true Chr03: 79089728-79098304 Eucalyptus grandis
Eucgr.C04195 5.0kb downstream 5.0kb downstream 5000 false Chr03: 79093305-79098304 Eucalyptus grandis
Eucgr.C04195 10.0kb upstream 10.0kb upstream 13577 true Chr03: 79079728-79093304 Eucalyptus grandis
Eucgr.C04195 10.0kb upstream 10.0kb upstream 10000 false Chr03: 79079728-79089727 Eucalyptus grandis
Eucgr.C04195 10.0kb downstream 10.0kb downstream 13577 true Chr03: 79089728-79103304 Eucalyptus grandis
Eucgr.C04195 10.0kb downstream 10.0kb downstream 10000 false Chr03: 79093305-79103304 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071487 5270 Rosid View MSA
123745089 5271 Pentapetalae View MSA
122792689 5272 Eudicot View MSA
122048288 5273 Angiosperm View MSA
121348705 5274 Embryophyte View MSA
123423886 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.0108 0.0 86.8924 High  
cufflinks 19.6394 0.0 45.2832   Low
cufflinks 33.9095 0.0 75.926 High  
cufflinks 40.86 0.0 90.848 High  
cufflinks 79.2403 0.0 175.595 High High
cufflinks 56.5127 0.0 125.061 High  

0 Strain