Gene : Eucgr.C04181 E. grandis v2.0
Defline:  (1 of 1) PTHR22769 - MUTT/NUDIX HYDROLASE Genomic Order:  3207
Name:  ? Eucgr.C04181 Secondary Identifier:  ? PAC:32037191
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5381 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C04181 0.5kb upstream 0.5kb upstream 5753 true Chr03: 78901891-78907643 Eucalyptus grandis
Eucgr.C04181 0.5kb upstream 0.5kb upstream 500 false Chr03: 78901891-78902390 Eucalyptus grandis
Eucgr.C04181 0.5kb downstream 0.5kb downstream 5753 true Chr03: 78902391-78908143 Eucalyptus grandis
Eucgr.C04181 0.5kb downstream 0.5kb downstream 500 false Chr03: 78907644-78908143 Eucalyptus grandis
Eucgr.C04181 1.0kb upstream 1.0kb upstream 6253 true Chr03: 78901391-78907643 Eucalyptus grandis
Eucgr.C04181 1.0kb upstream 1.0kb upstream 1000 false Chr03: 78901391-78902390 Eucalyptus grandis
Eucgr.C04181 1.0kb downstream 1.0kb downstream 6253 true Chr03: 78902391-78908643 Eucalyptus grandis
Eucgr.C04181 1.0kb downstream 1.0kb downstream 1000 false Chr03: 78907644-78908643 Eucalyptus grandis
Eucgr.C04181 2.0kb upstream 2.0kb upstream 7253 true Chr03: 78900391-78907643 Eucalyptus grandis
Eucgr.C04181 2.0kb upstream 2.0kb upstream 2000 false Chr03: 78900391-78902390 Eucalyptus grandis
Eucgr.C04181 2.0kb downstream 2.0kb downstream 7253 true Chr03: 78902391-78909643 Eucalyptus grandis
Eucgr.C04181 2.0kb downstream 2.0kb downstream 2000 false Chr03: 78907644-78909643 Eucalyptus grandis
Eucgr.C04181 5.0kb upstream 5.0kb upstream 10253 true Chr03: 78897391-78907643 Eucalyptus grandis
Eucgr.C04181 5.0kb upstream 5.0kb upstream 5000 false Chr03: 78897391-78902390 Eucalyptus grandis
Eucgr.C04181 5.0kb downstream 5.0kb downstream 10253 true Chr03: 78902391-78912643 Eucalyptus grandis
Eucgr.C04181 5.0kb downstream 5.0kb downstream 5000 false Chr03: 78907644-78912643 Eucalyptus grandis
Eucgr.C04181 10.0kb upstream 10.0kb upstream 15253 true Chr03: 78892391-78907643 Eucalyptus grandis
Eucgr.C04181 10.0kb upstream 10.0kb upstream 10000 false Chr03: 78892391-78902390 Eucalyptus grandis
Eucgr.C04181 10.0kb downstream 10.0kb downstream 15253 true Chr03: 78902391-78917643 Eucalyptus grandis
Eucgr.C04181 10.0kb downstream 10.0kb downstream 10000 false Chr03: 78907644-78917643 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065402 5270 Rosid View MSA
123742146 5271 Pentapetalae View MSA
122787569 5272 Eudicot View MSA
122041659 5273 Angiosperm View MSA
121345450 5274 Embryophyte View MSA
123427123 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.2535 0.0 40.4523   High
cufflinks 12.8406 0.0 28.7126    
cufflinks 10.5224 0.0 23.7378    
cufflinks 8.24515 0.0 18.8754    
cufflinks 5.94865 0.0 13.946   Low
cufflinks 5.85695 0.0 13.7597   Low

0 Strain