Gene : Eucgr.C04149 E. grandis v2.0
Defline:  (1 of 2) PTHR15696:SF0 - TELOMERASE-BINDING PROTEIN EST1A Genomic Order:  3180
Name:  ? Eucgr.C04149 Secondary Identifier:  ? PAC:32037925
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C04149 0.5kb upstream 0.5kb upstream 8167 true Chr03: 78586611-78594777 Eucalyptus grandis
Eucgr.C04149 0.5kb upstream 0.5kb upstream 500 false Chr03: 78594278-78594777 Eucalyptus grandis
Eucgr.C04149 0.5kb downstream 0.5kb downstream 8167 true Chr03: 78586111-78594277 Eucalyptus grandis
Eucgr.C04149 0.5kb downstream 0.5kb downstream 500 false Chr03: 78586111-78586610 Eucalyptus grandis
Eucgr.C04149 1.0kb upstream 1.0kb upstream 8667 true Chr03: 78586611-78595277 Eucalyptus grandis
Eucgr.C04149 1.0kb upstream 1.0kb upstream 1000 false Chr03: 78594278-78595277 Eucalyptus grandis
Eucgr.C04149 1.0kb downstream 1.0kb downstream 8667 true Chr03: 78585611-78594277 Eucalyptus grandis
Eucgr.C04149 1.0kb downstream 1.0kb downstream 1000 false Chr03: 78585611-78586610 Eucalyptus grandis
Eucgr.C04149 2.0kb upstream 2.0kb upstream 9667 true Chr03: 78586611-78596277 Eucalyptus grandis
Eucgr.C04149 2.0kb upstream 2.0kb upstream 2000 false Chr03: 78594278-78596277 Eucalyptus grandis
Eucgr.C04149 2.0kb downstream 2.0kb downstream 9667 true Chr03: 78584611-78594277 Eucalyptus grandis
Eucgr.C04149 2.0kb downstream 2.0kb downstream 2000 false Chr03: 78584611-78586610 Eucalyptus grandis
Eucgr.C04149 5.0kb upstream 5.0kb upstream 12667 true Chr03: 78586611-78599277 Eucalyptus grandis
Eucgr.C04149 5.0kb upstream 5.0kb upstream 5000 false Chr03: 78594278-78599277 Eucalyptus grandis
Eucgr.C04149 5.0kb downstream 5.0kb downstream 12667 true Chr03: 78581611-78594277 Eucalyptus grandis
Eucgr.C04149 5.0kb downstream 5.0kb downstream 5000 false Chr03: 78581611-78586610 Eucalyptus grandis
Eucgr.C04149 10.0kb upstream 10.0kb upstream 17667 true Chr03: 78586611-78604277 Eucalyptus grandis
Eucgr.C04149 10.0kb upstream 10.0kb upstream 10000 false Chr03: 78594278-78604277 Eucalyptus grandis
Eucgr.C04149 10.0kb downstream 10.0kb downstream 17667 true Chr03: 78576611-78594277 Eucalyptus grandis
Eucgr.C04149 10.0kb downstream 10.0kb downstream 10000 false Chr03: 78576611-78586610 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074641 5270 Rosid View MSA
123750882 5271 Pentapetalae View MSA
122793069 5272 Eudicot View MSA
122041626 5273 Angiosperm View MSA
121347724 5274 Embryophyte View MSA
123426231 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.1462 0.0 79.1072   High
cufflinks 18.2522 0.0 41.863    
cufflinks 20.0547 0.0 46.6473    
cufflinks 20.7866 0.0 52.4498    
cufflinks 12.2376 0.0 31.9512   Low
cufflinks 20.18 0.0 46.4765    

0 Strain