Gene : Eucgr.C04140 E. grandis v2.0
Defline:  (1 of 1) PTHR10257//PTHR10257:SF13 - SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B Genomic Order:  3172
Name:  ? Eucgr.C04140 Secondary Identifier:  ? PAC:32035943
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C04140 0.5kb upstream 0.5kb upstream 3632 true Chr03: 78519506-78523137 Eucalyptus grandis
Eucgr.C04140 0.5kb upstream 0.5kb upstream 500 false Chr03: 78519506-78520005 Eucalyptus grandis
Eucgr.C04140 0.5kb downstream 0.5kb downstream 3632 true Chr03: 78520006-78523637 Eucalyptus grandis
Eucgr.C04140 0.5kb downstream 0.5kb downstream 500 false Chr03: 78523138-78523637 Eucalyptus grandis
Eucgr.C04140 1.0kb upstream 1.0kb upstream 4132 true Chr03: 78519006-78523137 Eucalyptus grandis
Eucgr.C04140 1.0kb upstream 1.0kb upstream 1000 false Chr03: 78519006-78520005 Eucalyptus grandis
Eucgr.C04140 1.0kb downstream 1.0kb downstream 4132 true Chr03: 78520006-78524137 Eucalyptus grandis
Eucgr.C04140 1.0kb downstream 1.0kb downstream 1000 false Chr03: 78523138-78524137 Eucalyptus grandis
Eucgr.C04140 2.0kb upstream 2.0kb upstream 5132 true Chr03: 78518006-78523137 Eucalyptus grandis
Eucgr.C04140 2.0kb upstream 2.0kb upstream 2000 false Chr03: 78518006-78520005 Eucalyptus grandis
Eucgr.C04140 2.0kb downstream 2.0kb downstream 5132 true Chr03: 78520006-78525137 Eucalyptus grandis
Eucgr.C04140 2.0kb downstream 2.0kb downstream 2000 false Chr03: 78523138-78525137 Eucalyptus grandis
Eucgr.C04140 5.0kb upstream 5.0kb upstream 8132 true Chr03: 78515006-78523137 Eucalyptus grandis
Eucgr.C04140 5.0kb upstream 5.0kb upstream 5000 false Chr03: 78515006-78520005 Eucalyptus grandis
Eucgr.C04140 5.0kb downstream 5.0kb downstream 8132 true Chr03: 78520006-78528137 Eucalyptus grandis
Eucgr.C04140 5.0kb downstream 5.0kb downstream 5000 false Chr03: 78523138-78528137 Eucalyptus grandis
Eucgr.C04140 10.0kb upstream 10.0kb upstream 13132 true Chr03: 78510006-78523137 Eucalyptus grandis
Eucgr.C04140 10.0kb upstream 10.0kb upstream 10000 false Chr03: 78510006-78520005 Eucalyptus grandis
Eucgr.C04140 10.0kb downstream 10.0kb downstream 13132 true Chr03: 78520006-78533137 Eucalyptus grandis
Eucgr.C04140 10.0kb downstream 10.0kb downstream 10000 false Chr03: 78523138-78533137 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026563 5273 Angiosperm View MSA
124069819 5270 Rosid View MSA
123744621 5271 Pentapetalae View MSA
122789536 5272 Eudicot View MSA
121296391 5274 Embryophyte View MSA
123334563 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.3104 0.0 28.5636    
cufflinks 35.7012 0.0 82.337   High
cufflinks 10.3982 0.0 27.0396    
cufflinks 31.6812 0.0 80.4501   High
cufflinks 19.6463 0.0 44.2337    
cufflinks 10.4384 0.0 24.6664    

0 Strain