Gene : Eucgr.C04084 E. grandis v2.0
Defline:  (1 of 1) KOG3172 - Small nuclear ribonucleoprotein Sm D3 Genomic Order:  3424
Name:  ? Eucgr.C04084 Secondary Identifier:  ? PAC:32039443
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C04084 0.5kb upstream 0.5kb upstream 9890 true Chr03: 82817787-82827676 Eucalyptus grandis
Eucgr.C04084 0.5kb upstream 0.5kb upstream 500 false Chr03: 82817787-82818286 Eucalyptus grandis
Eucgr.C04084 0.5kb downstream 0.5kb downstream 9890 true Chr03: 82818287-82828176 Eucalyptus grandis
Eucgr.C04084 0.5kb downstream 0.5kb downstream 500 false Chr03: 82827677-82828176 Eucalyptus grandis
Eucgr.C04084 1.0kb upstream 1.0kb upstream 10390 true Chr03: 82817287-82827676 Eucalyptus grandis
Eucgr.C04084 1.0kb upstream 1.0kb upstream 1000 false Chr03: 82817287-82818286 Eucalyptus grandis
Eucgr.C04084 1.0kb downstream 1.0kb downstream 10390 true Chr03: 82818287-82828676 Eucalyptus grandis
Eucgr.C04084 1.0kb downstream 1.0kb downstream 1000 false Chr03: 82827677-82828676 Eucalyptus grandis
Eucgr.C04084 2.0kb upstream 2.0kb upstream 11390 true Chr03: 82816287-82827676 Eucalyptus grandis
Eucgr.C04084 2.0kb upstream 2.0kb upstream 2000 false Chr03: 82816287-82818286 Eucalyptus grandis
Eucgr.C04084 2.0kb downstream 2.0kb downstream 11390 true Chr03: 82818287-82829676 Eucalyptus grandis
Eucgr.C04084 2.0kb downstream 2.0kb downstream 2000 false Chr03: 82827677-82829676 Eucalyptus grandis
Eucgr.C04084 5.0kb upstream 5.0kb upstream 14390 true Chr03: 82813287-82827676 Eucalyptus grandis
Eucgr.C04084 5.0kb upstream 5.0kb upstream 5000 false Chr03: 82813287-82818286 Eucalyptus grandis
Eucgr.C04084 5.0kb downstream 5.0kb downstream 14390 true Chr03: 82818287-82832676 Eucalyptus grandis
Eucgr.C04084 5.0kb downstream 5.0kb downstream 5000 false Chr03: 82827677-82832676 Eucalyptus grandis
Eucgr.C04084 10.0kb upstream 10.0kb upstream 19390 true Chr03: 82808287-82827676 Eucalyptus grandis
Eucgr.C04084 10.0kb upstream 10.0kb upstream 10000 false Chr03: 82808287-82818286 Eucalyptus grandis
Eucgr.C04084 10.0kb downstream 10.0kb downstream 19390 true Chr03: 82818287-82837676 Eucalyptus grandis
Eucgr.C04084 10.0kb downstream 10.0kb downstream 10000 false Chr03: 82827677-82837676 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071262 5270 Rosid View MSA
123746571 5271 Pentapetalae View MSA
122793733 5272 Eudicot View MSA
122047121 5273 Angiosperm View MSA
121348903 5274 Embryophyte View MSA
123424585 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 74.7962 0.0 199.017 High  
cufflinks 43.5652 0.0 97.8263 High Low
cufflinks 66.5485 0.0 177.058 High  
cufflinks 50.202 0.0 133.147 High  
cufflinks 99.9945 0.0 251.786 High High
cufflinks 47.2362 0.0 126.684 High  

0 Strain