Gene : Eucgr.C04027 E. grandis v2.0
Defline:  (1 of 1) PTHR12136//PTHR12136:SF38 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR Genomic Order:  3470
Name:  ? Eucgr.C04027 Secondary Identifier:  ? PAC:32039310
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C04027 0.5kb upstream 0.5kb upstream 1788 true Chr03: 83366600-83368387 Eucalyptus grandis
Eucgr.C04027 0.5kb upstream 0.5kb upstream 500 false Chr03: 83367888-83368387 Eucalyptus grandis
Eucgr.C04027 0.5kb downstream 0.5kb downstream 1788 true Chr03: 83366100-83367887 Eucalyptus grandis
Eucgr.C04027 0.5kb downstream 0.5kb downstream 500 false Chr03: 83366100-83366599 Eucalyptus grandis
Eucgr.C04027 1.0kb upstream 1.0kb upstream 2288 true Chr03: 83366600-83368887 Eucalyptus grandis
Eucgr.C04027 1.0kb upstream 1.0kb upstream 1000 false Chr03: 83367888-83368887 Eucalyptus grandis
Eucgr.C04027 1.0kb downstream 1.0kb downstream 2288 true Chr03: 83365600-83367887 Eucalyptus grandis
Eucgr.C04027 1.0kb downstream 1.0kb downstream 1000 false Chr03: 83365600-83366599 Eucalyptus grandis
Eucgr.C04027 2.0kb upstream 2.0kb upstream 3288 true Chr03: 83366600-83369887 Eucalyptus grandis
Eucgr.C04027 2.0kb upstream 2.0kb upstream 2000 false Chr03: 83367888-83369887 Eucalyptus grandis
Eucgr.C04027 2.0kb downstream 2.0kb downstream 3288 true Chr03: 83364600-83367887 Eucalyptus grandis
Eucgr.C04027 2.0kb downstream 2.0kb downstream 2000 false Chr03: 83364600-83366599 Eucalyptus grandis
Eucgr.C04027 5.0kb upstream 5.0kb upstream 6288 true Chr03: 83366600-83372887 Eucalyptus grandis
Eucgr.C04027 5.0kb upstream 5.0kb upstream 5000 false Chr03: 83367888-83372887 Eucalyptus grandis
Eucgr.C04027 5.0kb downstream 5.0kb downstream 6288 true Chr03: 83361600-83367887 Eucalyptus grandis
Eucgr.C04027 5.0kb downstream 5.0kb downstream 5000 false Chr03: 83361600-83366599 Eucalyptus grandis
Eucgr.C04027 10.0kb upstream 10.0kb upstream 11288 true Chr03: 83366600-83377887 Eucalyptus grandis
Eucgr.C04027 10.0kb upstream 10.0kb upstream 10000 false Chr03: 83367888-83377887 Eucalyptus grandis
Eucgr.C04027 10.0kb downstream 10.0kb downstream 11288 true Chr03: 83356600-83367887 Eucalyptus grandis
Eucgr.C04027 10.0kb downstream 10.0kb downstream 10000 false Chr03: 83356600-83366599 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064079 5270 Rosid View MSA
123745127 5271 Pentapetalae View MSA
122790328 5272 Eudicot View MSA
122048003 5273 Angiosperm View MSA
121346001 5274 Embryophyte View MSA
123380307 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9764 0.0 32.8729    
cufflinks 9.00699 0.0 22.4044    
cufflinks 11.068 0.0 26.9402    
cufflinks 5.09404 0.0 13.4907   Low
cufflinks 18.0561 0.0 41.8596   High
cufflinks 16.1329 0.0 37.0678    

0 Strain