Gene : Eucgr.C04018 E. grandis v2.0
Defline:  (1 of 4) PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED Genomic Order:  3479
Name:  ? Eucgr.C04018 Secondary Identifier:  ? PAC:32040265
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C04018 0.5kb upstream 0.5kb upstream 8512 true Chr03: 83508271-83516782 Eucalyptus grandis
Eucgr.C04018 0.5kb upstream 0.5kb upstream 500 false Chr03: 83508271-83508770 Eucalyptus grandis
Eucgr.C04018 0.5kb downstream 0.5kb downstream 8512 true Chr03: 83508771-83517282 Eucalyptus grandis
Eucgr.C04018 0.5kb downstream 0.5kb downstream 500 false Chr03: 83516783-83517282 Eucalyptus grandis
Eucgr.C04018 1.0kb upstream 1.0kb upstream 9012 true Chr03: 83507771-83516782 Eucalyptus grandis
Eucgr.C04018 1.0kb upstream 1.0kb upstream 1000 false Chr03: 83507771-83508770 Eucalyptus grandis
Eucgr.C04018 1.0kb downstream 1.0kb downstream 9012 true Chr03: 83508771-83517782 Eucalyptus grandis
Eucgr.C04018 1.0kb downstream 1.0kb downstream 1000 false Chr03: 83516783-83517782 Eucalyptus grandis
Eucgr.C04018 2.0kb upstream 2.0kb upstream 10012 true Chr03: 83506771-83516782 Eucalyptus grandis
Eucgr.C04018 2.0kb upstream 2.0kb upstream 2000 false Chr03: 83506771-83508770 Eucalyptus grandis
Eucgr.C04018 2.0kb downstream 2.0kb downstream 10012 true Chr03: 83508771-83518782 Eucalyptus grandis
Eucgr.C04018 2.0kb downstream 2.0kb downstream 2000 false Chr03: 83516783-83518782 Eucalyptus grandis
Eucgr.C04018 5.0kb upstream 5.0kb upstream 13012 true Chr03: 83503771-83516782 Eucalyptus grandis
Eucgr.C04018 5.0kb upstream 5.0kb upstream 5000 false Chr03: 83503771-83508770 Eucalyptus grandis
Eucgr.C04018 5.0kb downstream 5.0kb downstream 13012 true Chr03: 83508771-83521782 Eucalyptus grandis
Eucgr.C04018 5.0kb downstream 5.0kb downstream 5000 false Chr03: 83516783-83521782 Eucalyptus grandis
Eucgr.C04018 10.0kb upstream 10.0kb upstream 18012 true Chr03: 83498771-83516782 Eucalyptus grandis
Eucgr.C04018 10.0kb upstream 10.0kb upstream 10000 false Chr03: 83498771-83508770 Eucalyptus grandis
Eucgr.C04018 10.0kb downstream 10.0kb downstream 18012 true Chr03: 83508771-83526782 Eucalyptus grandis
Eucgr.C04018 10.0kb downstream 10.0kb downstream 10000 false Chr03: 83516783-83526782 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069619 5270 Rosid View MSA
123738264 5271 Pentapetalae View MSA
122797340 5272 Eudicot View MSA
122048060 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.2783 0.0 31.6818   Low
cufflinks 47.049 0.0 106.896 High High
cufflinks 17.4189 0.0 38.5327    
cufflinks 43.7493 0.0 99.0396 High High
cufflinks 27.9372 0.0 62.0582    
cufflinks 16.5084 0.0 36.5582    

0 Strain