Gene : Eucgr.C04010 E. grandis v2.0
Defline:  (1 of 1) PTHR11717:SF2 - PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED Genomic Order:  3485
Name:  ? Eucgr.C04010 Secondary Identifier:  ? PAC:32038942
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C04010 0.5kb upstream 0.5kb upstream 1901 true Chr03: 83563817-83565717 Eucalyptus grandis
Eucgr.C04010 0.5kb upstream 0.5kb upstream 500 false Chr03: 83563817-83564316 Eucalyptus grandis
Eucgr.C04010 0.5kb downstream 0.5kb downstream 1901 true Chr03: 83564317-83566217 Eucalyptus grandis
Eucgr.C04010 0.5kb downstream 0.5kb downstream 500 false Chr03: 83565718-83566217 Eucalyptus grandis
Eucgr.C04010 1.0kb upstream 1.0kb upstream 2401 true Chr03: 83563317-83565717 Eucalyptus grandis
Eucgr.C04010 1.0kb upstream 1.0kb upstream 1000 false Chr03: 83563317-83564316 Eucalyptus grandis
Eucgr.C04010 1.0kb downstream 1.0kb downstream 2401 true Chr03: 83564317-83566717 Eucalyptus grandis
Eucgr.C04010 1.0kb downstream 1.0kb downstream 1000 false Chr03: 83565718-83566717 Eucalyptus grandis
Eucgr.C04010 2.0kb upstream 2.0kb upstream 3401 true Chr03: 83562317-83565717 Eucalyptus grandis
Eucgr.C04010 2.0kb upstream 2.0kb upstream 2000 false Chr03: 83562317-83564316 Eucalyptus grandis
Eucgr.C04010 2.0kb downstream 2.0kb downstream 3401 true Chr03: 83564317-83567717 Eucalyptus grandis
Eucgr.C04010 2.0kb downstream 2.0kb downstream 2000 false Chr03: 83565718-83567717 Eucalyptus grandis
Eucgr.C04010 5.0kb upstream 5.0kb upstream 6401 true Chr03: 83559317-83565717 Eucalyptus grandis
Eucgr.C04010 5.0kb upstream 5.0kb upstream 5000 false Chr03: 83559317-83564316 Eucalyptus grandis
Eucgr.C04010 5.0kb downstream 5.0kb downstream 6401 true Chr03: 83564317-83570717 Eucalyptus grandis
Eucgr.C04010 5.0kb downstream 5.0kb downstream 5000 false Chr03: 83565718-83570717 Eucalyptus grandis
Eucgr.C04010 10.0kb upstream 10.0kb upstream 11401 true Chr03: 83554317-83565717 Eucalyptus grandis
Eucgr.C04010 10.0kb upstream 10.0kb upstream 10000 false Chr03: 83554317-83564316 Eucalyptus grandis
Eucgr.C04010 10.0kb downstream 10.0kb downstream 11401 true Chr03: 83564317-83575717 Eucalyptus grandis
Eucgr.C04010 10.0kb downstream 10.0kb downstream 10000 false Chr03: 83565718-83575717 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065557 5270 Rosid View MSA
123751866 5271 Pentapetalae View MSA
122787633 5272 Eudicot View MSA
122042660 5273 Angiosperm View MSA
121347081 5274 Embryophyte View MSA
123425673 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.1561 0.0 22.8923    
cufflinks 10.4885 0.0 25.8594    
cufflinks 6.59368 0.0 17.0419    
cufflinks 7.38174 0.0 18.8203    
cufflinks 13.1946 0.0 31.8001   High
cufflinks 6.64814 0.0 17.0678    

0 Strain