Gene : Eucgr.C04012 E. grandis v2.0
Defline:  (1 of 3) PTHR10961 - PEROXISOMAL SARCOSINE OXIDASE Genomic Order:  3483
Name:  ? Eucgr.C04012 Secondary Identifier:  ? PAC:32039811
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C04012 0.5kb upstream 0.5kb upstream 1759 true Chr03: 83541728-83543486 Eucalyptus grandis
Eucgr.C04012 0.5kb upstream 0.5kb upstream 500 false Chr03: 83541728-83542227 Eucalyptus grandis
Eucgr.C04012 0.5kb downstream 0.5kb downstream 1759 true Chr03: 83542228-83543986 Eucalyptus grandis
Eucgr.C04012 0.5kb downstream 0.5kb downstream 500 false Chr03: 83543487-83543986 Eucalyptus grandis
Eucgr.C04012 1.0kb upstream 1.0kb upstream 2259 true Chr03: 83541228-83543486 Eucalyptus grandis
Eucgr.C04012 1.0kb upstream 1.0kb upstream 1000 false Chr03: 83541228-83542227 Eucalyptus grandis
Eucgr.C04012 1.0kb downstream 1.0kb downstream 2259 true Chr03: 83542228-83544486 Eucalyptus grandis
Eucgr.C04012 1.0kb downstream 1.0kb downstream 1000 false Chr03: 83543487-83544486 Eucalyptus grandis
Eucgr.C04012 2.0kb upstream 2.0kb upstream 3259 true Chr03: 83540228-83543486 Eucalyptus grandis
Eucgr.C04012 2.0kb upstream 2.0kb upstream 2000 false Chr03: 83540228-83542227 Eucalyptus grandis
Eucgr.C04012 2.0kb downstream 2.0kb downstream 3259 true Chr03: 83542228-83545486 Eucalyptus grandis
Eucgr.C04012 2.0kb downstream 2.0kb downstream 2000 false Chr03: 83543487-83545486 Eucalyptus grandis
Eucgr.C04012 5.0kb upstream 5.0kb upstream 6259 true Chr03: 83537228-83543486 Eucalyptus grandis
Eucgr.C04012 5.0kb upstream 5.0kb upstream 5000 false Chr03: 83537228-83542227 Eucalyptus grandis
Eucgr.C04012 5.0kb downstream 5.0kb downstream 6259 true Chr03: 83542228-83548486 Eucalyptus grandis
Eucgr.C04012 5.0kb downstream 5.0kb downstream 5000 false Chr03: 83543487-83548486 Eucalyptus grandis
Eucgr.C04012 10.0kb upstream 10.0kb upstream 11259 true Chr03: 83532228-83543486 Eucalyptus grandis
Eucgr.C04012 10.0kb upstream 10.0kb upstream 10000 false Chr03: 83532228-83542227 Eucalyptus grandis
Eucgr.C04012 10.0kb downstream 10.0kb downstream 11259 true Chr03: 83542228-83553486 Eucalyptus grandis
Eucgr.C04012 10.0kb downstream 10.0kb downstream 10000 false Chr03: 83543487-83553486 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067197 5270 Rosid View MSA
123745961 5271 Pentapetalae View MSA
122793788 5272 Eudicot View MSA
122051106 5273 Angiosperm View MSA
121351535 5274 Embryophyte View MSA
123427900 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.46783 0.0 17.8262    
cufflinks 0.887794 0.0 2.62721   Low
cufflinks 8.48564 0.0 20.0368    
cufflinks 1.21582 0.0 3.47152    
cufflinks 1.50208 0.0 4.19586    
cufflinks 8.00688 0.0 18.9641    

0 Strain