Gene : Eucgr.C03936 E. grandis v2.0
Defline:  (1 of 2) PTHR12161:SF13 - REGULATOR OF VPS4 ACTIVITY PROTEIN-RELATED Genomic Order:  2928
Name:  ? Eucgr.C03936 Secondary Identifier:  ? PAC:32037476
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03936 0.5kb upstream 0.5kb upstream 3736 true Chr03: 74072515-74076250 Eucalyptus grandis
Eucgr.C03936 0.5kb upstream 0.5kb upstream 500 false Chr03: 74072515-74073014 Eucalyptus grandis
Eucgr.C03936 0.5kb downstream 0.5kb downstream 3736 true Chr03: 74073015-74076750 Eucalyptus grandis
Eucgr.C03936 0.5kb downstream 0.5kb downstream 500 false Chr03: 74076251-74076750 Eucalyptus grandis
Eucgr.C03936 1.0kb upstream 1.0kb upstream 4236 true Chr03: 74072015-74076250 Eucalyptus grandis
Eucgr.C03936 1.0kb upstream 1.0kb upstream 1000 false Chr03: 74072015-74073014 Eucalyptus grandis
Eucgr.C03936 1.0kb downstream 1.0kb downstream 4236 true Chr03: 74073015-74077250 Eucalyptus grandis
Eucgr.C03936 1.0kb downstream 1.0kb downstream 1000 false Chr03: 74076251-74077250 Eucalyptus grandis
Eucgr.C03936 2.0kb upstream 2.0kb upstream 5236 true Chr03: 74071015-74076250 Eucalyptus grandis
Eucgr.C03936 2.0kb upstream 2.0kb upstream 2000 false Chr03: 74071015-74073014 Eucalyptus grandis
Eucgr.C03936 2.0kb downstream 2.0kb downstream 5236 true Chr03: 74073015-74078250 Eucalyptus grandis
Eucgr.C03936 2.0kb downstream 2.0kb downstream 2000 false Chr03: 74076251-74078250 Eucalyptus grandis
Eucgr.C03936 5.0kb upstream 5.0kb upstream 8236 true Chr03: 74068015-74076250 Eucalyptus grandis
Eucgr.C03936 5.0kb upstream 5.0kb upstream 5000 false Chr03: 74068015-74073014 Eucalyptus grandis
Eucgr.C03936 5.0kb downstream 5.0kb downstream 8236 true Chr03: 74073015-74081250 Eucalyptus grandis
Eucgr.C03936 5.0kb downstream 5.0kb downstream 5000 false Chr03: 74076251-74081250 Eucalyptus grandis
Eucgr.C03936 10.0kb upstream 10.0kb upstream 13236 true Chr03: 74063015-74076250 Eucalyptus grandis
Eucgr.C03936 10.0kb upstream 10.0kb upstream 10000 false Chr03: 74063015-74073014 Eucalyptus grandis
Eucgr.C03936 10.0kb downstream 10.0kb downstream 13236 true Chr03: 74073015-74086250 Eucalyptus grandis
Eucgr.C03936 10.0kb downstream 10.0kb downstream 10000 false Chr03: 74076251-74086250 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026573 5273 Angiosperm View MSA
124050952 5270 Rosid View MSA
123738388 5271 Pentapetalae View MSA
122790971 5272 Eudicot View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.94954 0.0 16.2766    
cufflinks 9.15541 0.0 21.8555    
cufflinks 15.3236 0.0 34.9357   High
cufflinks 6.4542 0.0 15.1301    
cufflinks 12.0452 0.0 27.8999    
cufflinks 3.81615 0.0 9.71474   Low

0 Strain