Gene : Eucgr.C03953 E. grandis v2.0
Defline:  (1 of 2) PF01656//PF01883//PF06155 - CobQ/CobB/MinD/ParA nucleotide binding domain (CbiA) // Domain of unknown function DUF59 (DUF59) // Protein of unknown function (DUF971) (DUF971) Genomic Order:  3156
Name:  ? Eucgr.C03953 Secondary Identifier:  ? PAC:32039252
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03953 0.5kb upstream 0.5kb upstream 6415 true Chr03: 78185063-78191477 Eucalyptus grandis
Eucgr.C03953 0.5kb upstream 0.5kb upstream 500 false Chr03: 78185063-78185562 Eucalyptus grandis
Eucgr.C03953 0.5kb downstream 0.5kb downstream 6415 true Chr03: 78185563-78191977 Eucalyptus grandis
Eucgr.C03953 0.5kb downstream 0.5kb downstream 500 false Chr03: 78191478-78191977 Eucalyptus grandis
Eucgr.C03953 1.0kb upstream 1.0kb upstream 6915 true Chr03: 78184563-78191477 Eucalyptus grandis
Eucgr.C03953 1.0kb upstream 1.0kb upstream 1000 false Chr03: 78184563-78185562 Eucalyptus grandis
Eucgr.C03953 1.0kb downstream 1.0kb downstream 6915 true Chr03: 78185563-78192477 Eucalyptus grandis
Eucgr.C03953 1.0kb downstream 1.0kb downstream 1000 false Chr03: 78191478-78192477 Eucalyptus grandis
Eucgr.C03953 2.0kb upstream 2.0kb upstream 7915 true Chr03: 78183563-78191477 Eucalyptus grandis
Eucgr.C03953 2.0kb upstream 2.0kb upstream 2000 false Chr03: 78183563-78185562 Eucalyptus grandis
Eucgr.C03953 2.0kb downstream 2.0kb downstream 7915 true Chr03: 78185563-78193477 Eucalyptus grandis
Eucgr.C03953 2.0kb downstream 2.0kb downstream 2000 false Chr03: 78191478-78193477 Eucalyptus grandis
Eucgr.C03953 5.0kb upstream 5.0kb upstream 10915 true Chr03: 78180563-78191477 Eucalyptus grandis
Eucgr.C03953 5.0kb upstream 5.0kb upstream 5000 false Chr03: 78180563-78185562 Eucalyptus grandis
Eucgr.C03953 5.0kb downstream 5.0kb downstream 10915 true Chr03: 78185563-78196477 Eucalyptus grandis
Eucgr.C03953 5.0kb downstream 5.0kb downstream 5000 false Chr03: 78191478-78196477 Eucalyptus grandis
Eucgr.C03953 10.0kb upstream 10.0kb upstream 15915 true Chr03: 78175563-78191477 Eucalyptus grandis
Eucgr.C03953 10.0kb upstream 10.0kb upstream 10000 false Chr03: 78175563-78185562 Eucalyptus grandis
Eucgr.C03953 10.0kb downstream 10.0kb downstream 15915 true Chr03: 78185563-78201477 Eucalyptus grandis
Eucgr.C03953 10.0kb downstream 10.0kb downstream 10000 false Chr03: 78191478-78201477 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072691 5270 Rosid View MSA
123738280 5271 Pentapetalae View MSA
122788075 5272 Eudicot View MSA
122042012 5273 Angiosperm View MSA
121347144 5274 Embryophyte View MSA
123424457 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.17687 0.0 10.6182    
cufflinks 1.31899 0.0 3.93296   Low
cufflinks 2.91941 0.0 7.73227    
cufflinks 1.7166 0.0 4.85771    
cufflinks 2.28183 0.0 6.31095    
cufflinks 13.4776 0.0 30.9413   High

0 Strain