Gene : Eucgr.C03922 E. grandis v2.0
Defline:  (1 of 3) PTHR11014:SF55 - IAA-AMINO ACID HYDROLASE ILR1-LIKE 1-RELATED Genomic Order:  2937
Name:  ? Eucgr.C03922 Secondary Identifier:  ? PAC:32039558
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03922 0.5kb upstream 0.5kb upstream 4647 true Chr03: 74246081-74250727 Eucalyptus grandis
Eucgr.C03922 0.5kb upstream 0.5kb upstream 500 false Chr03: 74250228-74250727 Eucalyptus grandis
Eucgr.C03922 0.5kb downstream 0.5kb downstream 4647 true Chr03: 74245581-74250227 Eucalyptus grandis
Eucgr.C03922 0.5kb downstream 0.5kb downstream 500 false Chr03: 74245581-74246080 Eucalyptus grandis
Eucgr.C03922 1.0kb upstream 1.0kb upstream 5147 true Chr03: 74246081-74251227 Eucalyptus grandis
Eucgr.C03922 1.0kb upstream 1.0kb upstream 1000 false Chr03: 74250228-74251227 Eucalyptus grandis
Eucgr.C03922 1.0kb downstream 1.0kb downstream 5147 true Chr03: 74245081-74250227 Eucalyptus grandis
Eucgr.C03922 1.0kb downstream 1.0kb downstream 1000 false Chr03: 74245081-74246080 Eucalyptus grandis
Eucgr.C03922 2.0kb upstream 2.0kb upstream 6147 true Chr03: 74246081-74252227 Eucalyptus grandis
Eucgr.C03922 2.0kb upstream 2.0kb upstream 2000 false Chr03: 74250228-74252227 Eucalyptus grandis
Eucgr.C03922 2.0kb downstream 2.0kb downstream 6147 true Chr03: 74244081-74250227 Eucalyptus grandis
Eucgr.C03922 2.0kb downstream 2.0kb downstream 2000 false Chr03: 74244081-74246080 Eucalyptus grandis
Eucgr.C03922 5.0kb upstream 5.0kb upstream 9147 true Chr03: 74246081-74255227 Eucalyptus grandis
Eucgr.C03922 5.0kb upstream 5.0kb upstream 5000 false Chr03: 74250228-74255227 Eucalyptus grandis
Eucgr.C03922 5.0kb downstream 5.0kb downstream 9147 true Chr03: 74241081-74250227 Eucalyptus grandis
Eucgr.C03922 5.0kb downstream 5.0kb downstream 5000 false Chr03: 74241081-74246080 Eucalyptus grandis
Eucgr.C03922 10.0kb upstream 10.0kb upstream 14147 true Chr03: 74246081-74260227 Eucalyptus grandis
Eucgr.C03922 10.0kb upstream 10.0kb upstream 10000 false Chr03: 74250228-74260227 Eucalyptus grandis
Eucgr.C03922 10.0kb downstream 10.0kb downstream 14147 true Chr03: 74236081-74250227 Eucalyptus grandis
Eucgr.C03922 10.0kb downstream 10.0kb downstream 10000 false Chr03: 74236081-74246080 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073280 5270 Rosid View MSA
123745174 5271 Pentapetalae View MSA
122790280 5272 Eudicot View MSA
122042438 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.62248 0.0 13.3688    
cufflinks 4.78609 0.0 11.5935    
cufflinks 4.53972 0.0 11.1479    
cufflinks 3.82737 0.0 9.55865    
cufflinks 1.99903 0.0 5.60383   Low
cufflinks 10.2065 0.0 24.1056   High

0 Strain