Gene : Eucgr.C03842 E. grandis v2.0
Defline:  (1 of 1) PTHR33057:SF24 - OVATE FAMILY PROTEIN 8 Genomic Order:  3105
Name:  ? Eucgr.C03842 Secondary Identifier:  ? PAC:32038939
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03842 0.5kb upstream 0.5kb upstream 1536 true Chr03: 76985309-76986844 Eucalyptus grandis
Eucgr.C03842 0.5kb upstream 0.5kb upstream 500 false Chr03: 76985309-76985808 Eucalyptus grandis
Eucgr.C03842 0.5kb downstream 0.5kb downstream 1536 true Chr03: 76985809-76987344 Eucalyptus grandis
Eucgr.C03842 0.5kb downstream 0.5kb downstream 500 false Chr03: 76986845-76987344 Eucalyptus grandis
Eucgr.C03842 1.0kb upstream 1.0kb upstream 2036 true Chr03: 76984809-76986844 Eucalyptus grandis
Eucgr.C03842 1.0kb upstream 1.0kb upstream 1000 false Chr03: 76984809-76985808 Eucalyptus grandis
Eucgr.C03842 1.0kb downstream 1.0kb downstream 2036 true Chr03: 76985809-76987844 Eucalyptus grandis
Eucgr.C03842 1.0kb downstream 1.0kb downstream 1000 false Chr03: 76986845-76987844 Eucalyptus grandis
Eucgr.C03842 2.0kb upstream 2.0kb upstream 3036 true Chr03: 76983809-76986844 Eucalyptus grandis
Eucgr.C03842 2.0kb upstream 2.0kb upstream 2000 false Chr03: 76983809-76985808 Eucalyptus grandis
Eucgr.C03842 2.0kb downstream 2.0kb downstream 3036 true Chr03: 76985809-76988844 Eucalyptus grandis
Eucgr.C03842 2.0kb downstream 2.0kb downstream 2000 false Chr03: 76986845-76988844 Eucalyptus grandis
Eucgr.C03842 5.0kb upstream 5.0kb upstream 6036 true Chr03: 76980809-76986844 Eucalyptus grandis
Eucgr.C03842 5.0kb upstream 5.0kb upstream 5000 false Chr03: 76980809-76985808 Eucalyptus grandis
Eucgr.C03842 5.0kb downstream 5.0kb downstream 6036 true Chr03: 76985809-76991844 Eucalyptus grandis
Eucgr.C03842 5.0kb downstream 5.0kb downstream 5000 false Chr03: 76986845-76991844 Eucalyptus grandis
Eucgr.C03842 10.0kb upstream 10.0kb upstream 11036 true Chr03: 76975809-76986844 Eucalyptus grandis
Eucgr.C03842 10.0kb upstream 10.0kb upstream 10000 false Chr03: 76975809-76985808 Eucalyptus grandis
Eucgr.C03842 10.0kb downstream 10.0kb downstream 11036 true Chr03: 76985809-76996844 Eucalyptus grandis
Eucgr.C03842 10.0kb downstream 10.0kb downstream 10000 false Chr03: 76986845-76996844 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060850 5270 Rosid View MSA
123748591 5271 Pentapetalae View MSA
122791158 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.795117 0.0 2.56635    
cufflinks 4.7626 0.0 12.8099   High
cufflinks 0.293661 0.0 1.1008 Low Low
cufflinks 1.19107 0.0 3.73232    
cufflinks 2.46639 0.0 7.05166    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain