Gene : Eucgr.D00261 E. grandis v2.0
Defline:  (1 of 2) PTHR13018:SF22 - EARLY-RESPONSIVE TO DEHYDRATION STRESS PROTEIN (ERD4) Genomic Order:  198
Name:  ? Eucgr.D00261 Secondary Identifier:  ? PAC:32050550
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00261 0.5kb upstream 0.5kb upstream 14443 true Chr04: 4366175-4380617 Eucalyptus grandis
Eucgr.D00261 0.5kb upstream 0.5kb upstream 500 false Chr04: 4380118-4380617 Eucalyptus grandis
Eucgr.D00261 0.5kb downstream 0.5kb downstream 14443 true Chr04: 4365675-4380117 Eucalyptus grandis
Eucgr.D00261 0.5kb downstream 0.5kb downstream 500 false Chr04: 4365675-4366174 Eucalyptus grandis
Eucgr.D00261 1.0kb upstream 1.0kb upstream 14943 true Chr04: 4366175-4381117 Eucalyptus grandis
Eucgr.D00261 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4380118-4381117 Eucalyptus grandis
Eucgr.D00261 1.0kb downstream 1.0kb downstream 14943 true Chr04: 4365175-4380117 Eucalyptus grandis
Eucgr.D00261 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4365175-4366174 Eucalyptus grandis
Eucgr.D00261 2.0kb upstream 2.0kb upstream 15943 true Chr04: 4366175-4382117 Eucalyptus grandis
Eucgr.D00261 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4380118-4382117 Eucalyptus grandis
Eucgr.D00261 2.0kb downstream 2.0kb downstream 15943 true Chr04: 4364175-4380117 Eucalyptus grandis
Eucgr.D00261 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4364175-4366174 Eucalyptus grandis
Eucgr.D00261 5.0kb upstream 5.0kb upstream 18943 true Chr04: 4366175-4385117 Eucalyptus grandis
Eucgr.D00261 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4380118-4385117 Eucalyptus grandis
Eucgr.D00261 5.0kb downstream 5.0kb downstream 18943 true Chr04: 4361175-4380117 Eucalyptus grandis
Eucgr.D00261 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4361175-4366174 Eucalyptus grandis
Eucgr.D00261 10.0kb upstream 10.0kb upstream 23943 true Chr04: 4366175-4390117 Eucalyptus grandis
Eucgr.D00261 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4380118-4390117 Eucalyptus grandis
Eucgr.D00261 10.0kb downstream 10.0kb downstream 23943 true Chr04: 4356175-4380117 Eucalyptus grandis
Eucgr.D00261 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4356175-4366174 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065174 5270 Rosid View MSA
123736391 5271 Pentapetalae View MSA
122785693 5272 Eudicot View MSA
122045968 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121348533 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 310.632 0.0 1101.25 High High
cufflinks 115.8 0.0 315.052 High Low
cufflinks 160.758 0.0 513.926 High  
cufflinks 126.451 0.0 424.425 High  
cufflinks 286.232 0.0 998.207 High  
cufflinks 259.716 0.0 858.219 High  

0 Strain