Gene : Eucgr.D00260 E. grandis v2.0
Defline:  (1 of 2) PTHR13018:SF22 - EARLY-RESPONSIVE TO DEHYDRATION STRESS PROTEIN (ERD4) Genomic Order:  197
Name:  ? Eucgr.D00260 Secondary Identifier:  ? PAC:32051884
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00260 0.5kb upstream 0.5kb upstream 6751 true Chr04: 4333663-4340413 Eucalyptus grandis
Eucgr.D00260 0.5kb upstream 0.5kb upstream 500 false Chr04: 4339914-4340413 Eucalyptus grandis
Eucgr.D00260 0.5kb downstream 0.5kb downstream 6751 true Chr04: 4333163-4339913 Eucalyptus grandis
Eucgr.D00260 0.5kb downstream 0.5kb downstream 500 false Chr04: 4333163-4333662 Eucalyptus grandis
Eucgr.D00260 1.0kb upstream 1.0kb upstream 7251 true Chr04: 4333663-4340913 Eucalyptus grandis
Eucgr.D00260 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4339914-4340913 Eucalyptus grandis
Eucgr.D00260 1.0kb downstream 1.0kb downstream 7251 true Chr04: 4332663-4339913 Eucalyptus grandis
Eucgr.D00260 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4332663-4333662 Eucalyptus grandis
Eucgr.D00260 2.0kb upstream 2.0kb upstream 8251 true Chr04: 4333663-4341913 Eucalyptus grandis
Eucgr.D00260 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4339914-4341913 Eucalyptus grandis
Eucgr.D00260 2.0kb downstream 2.0kb downstream 8251 true Chr04: 4331663-4339913 Eucalyptus grandis
Eucgr.D00260 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4331663-4333662 Eucalyptus grandis
Eucgr.D00260 5.0kb upstream 5.0kb upstream 11251 true Chr04: 4333663-4344913 Eucalyptus grandis
Eucgr.D00260 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4339914-4344913 Eucalyptus grandis
Eucgr.D00260 5.0kb downstream 5.0kb downstream 11251 true Chr04: 4328663-4339913 Eucalyptus grandis
Eucgr.D00260 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4328663-4333662 Eucalyptus grandis
Eucgr.D00260 10.0kb upstream 10.0kb upstream 16251 true Chr04: 4333663-4349913 Eucalyptus grandis
Eucgr.D00260 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4339914-4349913 Eucalyptus grandis
Eucgr.D00260 10.0kb downstream 10.0kb downstream 16251 true Chr04: 4323663-4339913 Eucalyptus grandis
Eucgr.D00260 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4323663-4333662 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065174 5270 Rosid View MSA
123736391 5271 Pentapetalae View MSA
122785693 5272 Eudicot View MSA
122045968 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121348533 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.79859 0.0 11.7152   High
cufflinks 0.824699 0.0 2.38755 Low  
cufflinks 2.06854 0.0 5.48218    
cufflinks 0.496717 0.0 1.52727   Low
cufflinks 3.90293 0.0 9.69259    
cufflinks 1.29294 0.0 3.60796    

0 Strain