Gene : Eucgr.D00190 E. grandis v2.0
Defline:  (1 of 1) PTHR19865 - U3 SMALL NUCLEOLAR RNA INTERACTING PROTEIN 2 Genomic Order:  140
Name:  ? Eucgr.D00190 Secondary Identifier:  ? PAC:32050426
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00190 0.5kb upstream 0.5kb upstream 8131 true Chr04: 3102179-3110309 Eucalyptus grandis
Eucgr.D00190 0.5kb upstream 0.5kb upstream 500 false Chr04: 3109810-3110309 Eucalyptus grandis
Eucgr.D00190 0.5kb downstream 0.5kb downstream 8131 true Chr04: 3101679-3109809 Eucalyptus grandis
Eucgr.D00190 0.5kb downstream 0.5kb downstream 500 false Chr04: 3101679-3102178 Eucalyptus grandis
Eucgr.D00190 1.0kb upstream 1.0kb upstream 8631 true Chr04: 3102179-3110809 Eucalyptus grandis
Eucgr.D00190 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3109810-3110809 Eucalyptus grandis
Eucgr.D00190 1.0kb downstream 1.0kb downstream 8631 true Chr04: 3101179-3109809 Eucalyptus grandis
Eucgr.D00190 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3101179-3102178 Eucalyptus grandis
Eucgr.D00190 2.0kb upstream 2.0kb upstream 9631 true Chr04: 3102179-3111809 Eucalyptus grandis
Eucgr.D00190 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3109810-3111809 Eucalyptus grandis
Eucgr.D00190 2.0kb downstream 2.0kb downstream 9631 true Chr04: 3100179-3109809 Eucalyptus grandis
Eucgr.D00190 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3100179-3102178 Eucalyptus grandis
Eucgr.D00190 5.0kb upstream 5.0kb upstream 12631 true Chr04: 3102179-3114809 Eucalyptus grandis
Eucgr.D00190 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3109810-3114809 Eucalyptus grandis
Eucgr.D00190 5.0kb downstream 5.0kb downstream 12631 true Chr04: 3097179-3109809 Eucalyptus grandis
Eucgr.D00190 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3097179-3102178 Eucalyptus grandis
Eucgr.D00190 10.0kb upstream 10.0kb upstream 17631 true Chr04: 3102179-3119809 Eucalyptus grandis
Eucgr.D00190 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3109810-3119809 Eucalyptus grandis
Eucgr.D00190 10.0kb downstream 10.0kb downstream 17631 true Chr04: 3092179-3109809 Eucalyptus grandis
Eucgr.D00190 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3092179-3102178 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062472 5270 Rosid View MSA
123737167 5271 Pentapetalae View MSA
122788897 5272 Eudicot View MSA
122043629 5273 Angiosperm View MSA
121343933 5274 Embryophyte View MSA
123424174 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.50069 0.0 17.5269    
cufflinks 8.04086 0.0 20.8586    
cufflinks 6.56281 0.0 15.1799    
cufflinks 9.50235 0.0 22.0502   High
cufflinks 5.50267 0.0 12.9294    
cufflinks 4.33885 0.0 12.7062   Low

0 Strain