Gene : Eucgr.D00196 E. grandis v2.0
Defline:  (1 of 1) PTHR11827 - SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS Genomic Order:  146
Name:  ? Eucgr.D00196 Secondary Identifier:  ? PAC:32050086
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00196 0.5kb upstream 0.5kb upstream 12192 true Chr04: 3270822-3283013 Eucalyptus grandis
Eucgr.D00196 0.5kb upstream 0.5kb upstream 500 false Chr04: 3282514-3283013 Eucalyptus grandis
Eucgr.D00196 0.5kb downstream 0.5kb downstream 12192 true Chr04: 3270322-3282513 Eucalyptus grandis
Eucgr.D00196 0.5kb downstream 0.5kb downstream 500 false Chr04: 3270322-3270821 Eucalyptus grandis
Eucgr.D00196 1.0kb upstream 1.0kb upstream 12692 true Chr04: 3270822-3283513 Eucalyptus grandis
Eucgr.D00196 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3282514-3283513 Eucalyptus grandis
Eucgr.D00196 1.0kb downstream 1.0kb downstream 12692 true Chr04: 3269822-3282513 Eucalyptus grandis
Eucgr.D00196 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3269822-3270821 Eucalyptus grandis
Eucgr.D00196 2.0kb upstream 2.0kb upstream 13692 true Chr04: 3270822-3284513 Eucalyptus grandis
Eucgr.D00196 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3282514-3284513 Eucalyptus grandis
Eucgr.D00196 2.0kb downstream 2.0kb downstream 13692 true Chr04: 3268822-3282513 Eucalyptus grandis
Eucgr.D00196 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3268822-3270821 Eucalyptus grandis
Eucgr.D00196 5.0kb upstream 5.0kb upstream 16692 true Chr04: 3270822-3287513 Eucalyptus grandis
Eucgr.D00196 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3282514-3287513 Eucalyptus grandis
Eucgr.D00196 5.0kb downstream 5.0kb downstream 16692 true Chr04: 3265822-3282513 Eucalyptus grandis
Eucgr.D00196 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3265822-3270821 Eucalyptus grandis
Eucgr.D00196 10.0kb upstream 10.0kb upstream 21692 true Chr04: 3270822-3292513 Eucalyptus grandis
Eucgr.D00196 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3282514-3292513 Eucalyptus grandis
Eucgr.D00196 10.0kb downstream 10.0kb downstream 21692 true Chr04: 3260822-3282513 Eucalyptus grandis
Eucgr.D00196 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3260822-3270821 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066171 5270 Rosid View MSA
123736860 5271 Pentapetalae View MSA
122786911 5272 Eudicot View MSA
122042525 5273 Angiosperm View MSA
121347955 5274 Embryophyte View MSA
123428198 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.4228 0.0 36.3181    
cufflinks 16.236 0.0 35.9086    
cufflinks 15.9532 0.0 35.2797    
cufflinks 32.8846 0.0 74.1076   High
cufflinks 11.2707 0.0 25.0089   Low
cufflinks 20.7528 0.0 45.9716    

0 Strain