Gene : Eucgr.D00178 E. grandis v2.0
Genomic Order:  129 Name:  ? Eucgr.D00178
Secondary Identifier:  ? PAC:32050782
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00178 0.5kb upstream 0.5kb upstream 6358 true Chr04: 2849142-2855499 Eucalyptus grandis
Eucgr.D00178 0.5kb upstream 0.5kb upstream 500 false Chr04: 2849142-2849641 Eucalyptus grandis
Eucgr.D00178 0.5kb downstream 0.5kb downstream 6358 true Chr04: 2849642-2855999 Eucalyptus grandis
Eucgr.D00178 0.5kb downstream 0.5kb downstream 500 false Chr04: 2855500-2855999 Eucalyptus grandis
Eucgr.D00178 1.0kb upstream 1.0kb upstream 6858 true Chr04: 2848642-2855499 Eucalyptus grandis
Eucgr.D00178 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2848642-2849641 Eucalyptus grandis
Eucgr.D00178 1.0kb downstream 1.0kb downstream 6858 true Chr04: 2849642-2856499 Eucalyptus grandis
Eucgr.D00178 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2855500-2856499 Eucalyptus grandis
Eucgr.D00178 2.0kb upstream 2.0kb upstream 7858 true Chr04: 2847642-2855499 Eucalyptus grandis
Eucgr.D00178 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2847642-2849641 Eucalyptus grandis
Eucgr.D00178 2.0kb downstream 2.0kb downstream 7858 true Chr04: 2849642-2857499 Eucalyptus grandis
Eucgr.D00178 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2855500-2857499 Eucalyptus grandis
Eucgr.D00178 5.0kb upstream 5.0kb upstream 10858 true Chr04: 2844642-2855499 Eucalyptus grandis
Eucgr.D00178 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2844642-2849641 Eucalyptus grandis
Eucgr.D00178 5.0kb downstream 5.0kb downstream 10858 true Chr04: 2849642-2860499 Eucalyptus grandis
Eucgr.D00178 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2855500-2860499 Eucalyptus grandis
Eucgr.D00178 10.0kb upstream 10.0kb upstream 15858 true Chr04: 2839642-2855499 Eucalyptus grandis
Eucgr.D00178 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2839642-2849641 Eucalyptus grandis
Eucgr.D00178 10.0kb downstream 10.0kb downstream 15858 true Chr04: 2849642-2865499 Eucalyptus grandis
Eucgr.D00178 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2855500-2865499 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065648 5270 Rosid View MSA
123739818 5271 Pentapetalae View MSA
122790531 5272 Eudicot View MSA
122045848 5273 Angiosperm View MSA
121343855 5274 Embryophyte View MSA
123425559 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.77089 0.0 8.3712    
cufflinks 3.49808 0.0 9.41924    
cufflinks 2.56 0.0 7.17795    
cufflinks 1.20056 0.0 3.86741    
cufflinks 0.299752 0.0 1.2425 Low Low
cufflinks 5.69151 0.0 14.3736   High

0 Strain