Gene : Eucgr.D00173 E. grandis v2.0
Defline:  (1 of 1) PTHR24095:SF181 - ACYL-COA SYNTHETASE FAMILY MEMBER 2, MITOCHONDRIAL Genomic Order:  124
Name:  ? Eucgr.D00173 Secondary Identifier:  ? PAC:32052244
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5837 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00173 0.5kb upstream 0.5kb upstream 3712 true Chr04: 2792728-2796439 Eucalyptus grandis
Eucgr.D00173 0.5kb upstream 0.5kb upstream 500 false Chr04: 2795940-2796439 Eucalyptus grandis
Eucgr.D00173 0.5kb downstream 0.5kb downstream 3712 true Chr04: 2792228-2795939 Eucalyptus grandis
Eucgr.D00173 0.5kb downstream 0.5kb downstream 500 false Chr04: 2792228-2792727 Eucalyptus grandis
Eucgr.D00173 1.0kb upstream 1.0kb upstream 4212 true Chr04: 2792728-2796939 Eucalyptus grandis
Eucgr.D00173 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2795940-2796939 Eucalyptus grandis
Eucgr.D00173 1.0kb downstream 1.0kb downstream 4212 true Chr04: 2791728-2795939 Eucalyptus grandis
Eucgr.D00173 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2791728-2792727 Eucalyptus grandis
Eucgr.D00173 2.0kb upstream 2.0kb upstream 5212 true Chr04: 2792728-2797939 Eucalyptus grandis
Eucgr.D00173 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2795940-2797939 Eucalyptus grandis
Eucgr.D00173 2.0kb downstream 2.0kb downstream 5212 true Chr04: 2790728-2795939 Eucalyptus grandis
Eucgr.D00173 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2790728-2792727 Eucalyptus grandis
Eucgr.D00173 5.0kb upstream 5.0kb upstream 8212 true Chr04: 2792728-2800939 Eucalyptus grandis
Eucgr.D00173 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2795940-2800939 Eucalyptus grandis
Eucgr.D00173 5.0kb downstream 5.0kb downstream 8212 true Chr04: 2787728-2795939 Eucalyptus grandis
Eucgr.D00173 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2787728-2792727 Eucalyptus grandis
Eucgr.D00173 10.0kb upstream 10.0kb upstream 13212 true Chr04: 2792728-2805939 Eucalyptus grandis
Eucgr.D00173 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2795940-2805939 Eucalyptus grandis
Eucgr.D00173 10.0kb downstream 10.0kb downstream 13212 true Chr04: 2782728-2795939 Eucalyptus grandis
Eucgr.D00173 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2782728-2792727 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061989 5270 Rosid View MSA
123752148 5271 Pentapetalae View MSA
122787718 5272 Eudicot View MSA
122042580 5273 Angiosperm View MSA
121346156 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.33606 0.0 17.8514    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.25327 0.0 13.1226    
cufflinks 0.137665 0.0 0.741617 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 10.6042 0.0 31.803    

0 Strain