Gene : Eucgr.D00111 E. grandis v2.0
Defline:  (1 of 2) PTHR21256 - HISTIDINOL DEHYDROGENASE HDH Genomic Order:  91
Name:  ? Eucgr.D00111 Secondary Identifier:  ? PAC:32051584
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis HISTSYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00111 0.5kb upstream 0.5kb upstream 8826 true Chr04: 1925940-1934765 Eucalyptus grandis
Eucgr.D00111 0.5kb upstream 0.5kb upstream 500 false Chr04: 1925940-1926439 Eucalyptus grandis
Eucgr.D00111 0.5kb downstream 0.5kb downstream 8826 true Chr04: 1926440-1935265 Eucalyptus grandis
Eucgr.D00111 0.5kb downstream 0.5kb downstream 500 false Chr04: 1934766-1935265 Eucalyptus grandis
Eucgr.D00111 1.0kb upstream 1.0kb upstream 9326 true Chr04: 1925440-1934765 Eucalyptus grandis
Eucgr.D00111 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1925440-1926439 Eucalyptus grandis
Eucgr.D00111 1.0kb downstream 1.0kb downstream 9326 true Chr04: 1926440-1935765 Eucalyptus grandis
Eucgr.D00111 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1934766-1935765 Eucalyptus grandis
Eucgr.D00111 2.0kb upstream 2.0kb upstream 10326 true Chr04: 1924440-1934765 Eucalyptus grandis
Eucgr.D00111 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1924440-1926439 Eucalyptus grandis
Eucgr.D00111 2.0kb downstream 2.0kb downstream 10326 true Chr04: 1926440-1936765 Eucalyptus grandis
Eucgr.D00111 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1934766-1936765 Eucalyptus grandis
Eucgr.D00111 5.0kb upstream 5.0kb upstream 13326 true Chr04: 1921440-1934765 Eucalyptus grandis
Eucgr.D00111 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1921440-1926439 Eucalyptus grandis
Eucgr.D00111 5.0kb downstream 5.0kb downstream 13326 true Chr04: 1926440-1939765 Eucalyptus grandis
Eucgr.D00111 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1934766-1939765 Eucalyptus grandis
Eucgr.D00111 10.0kb upstream 10.0kb upstream 18326 true Chr04: 1916440-1934765 Eucalyptus grandis
Eucgr.D00111 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1916440-1926439 Eucalyptus grandis
Eucgr.D00111 10.0kb downstream 10.0kb downstream 18326 true Chr04: 1926440-1944765 Eucalyptus grandis
Eucgr.D00111 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1934766-1944765 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061664 5270 Rosid View MSA
123738837 5271 Pentapetalae View MSA
122785994 5272 Eudicot View MSA
122046994 5273 Angiosperm View MSA
121351553 5274 Embryophyte View MSA
123424167 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.1466 0.0 48.4997    
cufflinks 6.84889 0.0 18.8434   Low
cufflinks 17.4024 0.0 43.3754    
cufflinks 9.73319 0.0 22.7803    
cufflinks 17.287 0.0 43.4951    
cufflinks 24.4479 0.0 61.1957   High

0 Strain