Gene : Eucgr.D00006 E. grandis v2.0
Defline:  (1 of 1) PTHR19845:SF6 - TRANSDUCIN/WD40 DOMAIN-CONTAINING PROTEIN Genomic Order:  6
Name:  ? Eucgr.D00006 Secondary Identifier:  ? PAC:32050409
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00006 0.5kb upstream 0.5kb upstream 7121 true Chr04: 75255-82375 Eucalyptus grandis
Eucgr.D00006 0.5kb upstream 0.5kb upstream 500 false Chr04: 81876-82375 Eucalyptus grandis
Eucgr.D00006 0.5kb downstream 0.5kb downstream 7121 true Chr04: 74755-81875 Eucalyptus grandis
Eucgr.D00006 0.5kb downstream 0.5kb downstream 500 false Chr04: 74755-75254 Eucalyptus grandis
Eucgr.D00006 1.0kb upstream 1.0kb upstream 7621 true Chr04: 75255-82875 Eucalyptus grandis
Eucgr.D00006 1.0kb upstream 1.0kb upstream 1000 false Chr04: 81876-82875 Eucalyptus grandis
Eucgr.D00006 1.0kb downstream 1.0kb downstream 7621 true Chr04: 74255-81875 Eucalyptus grandis
Eucgr.D00006 1.0kb downstream 1.0kb downstream 1000 false Chr04: 74255-75254 Eucalyptus grandis
Eucgr.D00006 2.0kb upstream 2.0kb upstream 8621 true Chr04: 75255-83875 Eucalyptus grandis
Eucgr.D00006 2.0kb upstream 2.0kb upstream 2000 false Chr04: 81876-83875 Eucalyptus grandis
Eucgr.D00006 2.0kb downstream 2.0kb downstream 8621 true Chr04: 73255-81875 Eucalyptus grandis
Eucgr.D00006 2.0kb downstream 2.0kb downstream 2000 false Chr04: 73255-75254 Eucalyptus grandis
Eucgr.D00006 5.0kb upstream 5.0kb upstream 11621 true Chr04: 75255-86875 Eucalyptus grandis
Eucgr.D00006 5.0kb upstream 5.0kb upstream 5000 false Chr04: 81876-86875 Eucalyptus grandis
Eucgr.D00006 5.0kb downstream 5.0kb downstream 11621 true Chr04: 70255-81875 Eucalyptus grandis
Eucgr.D00006 5.0kb downstream 5.0kb downstream 5000 false Chr04: 70255-75254 Eucalyptus grandis
Eucgr.D00006 10.0kb upstream 10.0kb upstream 16621 true Chr04: 75255-91875 Eucalyptus grandis
Eucgr.D00006 10.0kb upstream 10.0kb upstream 10000 false Chr04: 81876-91875 Eucalyptus grandis
Eucgr.D00006 10.0kb downstream 10.0kb downstream 16621 true Chr04: 65255-81875 Eucalyptus grandis
Eucgr.D00006 10.0kb downstream 10.0kb downstream 10000 false Chr04: 65255-75254 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061482 5270 Rosid View MSA
123740611 5271 Pentapetalae View MSA
122787574 5272 Eudicot View MSA
122044538 5273 Angiosperm View MSA
121346276 5274 Embryophyte View MSA
123380359 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.5186 0.0 37.2683    
cufflinks 7.16584 0.0 18.8471   Low
cufflinks 17.8644 0.0 50.1273    
cufflinks 15.2208 0.0 34.4493    
cufflinks 11.174 0.0 25.8722    
cufflinks 18.8546 0.0 52.1312    

0 Strain