Gene : Eucgr.D00017 E. grandis v2.0
Defline:  (1 of 1) PTHR32494:SF7 - ALLANTOATE DEIMINASE Genomic Order:  17
Name:  ? Eucgr.D00017 Secondary Identifier:  ? PAC:32050106
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5692 Eucalyptus grandis pathologic  
Egrandis PWY-5698 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00017 0.5kb upstream 0.5kb upstream 5031 true Chr04: 129958-134988 Eucalyptus grandis
Eucgr.D00017 0.5kb upstream 0.5kb upstream 500 false Chr04: 134489-134988 Eucalyptus grandis
Eucgr.D00017 0.5kb downstream 0.5kb downstream 5031 true Chr04: 129458-134488 Eucalyptus grandis
Eucgr.D00017 0.5kb downstream 0.5kb downstream 500 false Chr04: 129458-129957 Eucalyptus grandis
Eucgr.D00017 1.0kb upstream 1.0kb upstream 5531 true Chr04: 129958-135488 Eucalyptus grandis
Eucgr.D00017 1.0kb upstream 1.0kb upstream 1000 false Chr04: 134489-135488 Eucalyptus grandis
Eucgr.D00017 1.0kb downstream 1.0kb downstream 5531 true Chr04: 128958-134488 Eucalyptus grandis
Eucgr.D00017 1.0kb downstream 1.0kb downstream 1000 false Chr04: 128958-129957 Eucalyptus grandis
Eucgr.D00017 2.0kb upstream 2.0kb upstream 6531 true Chr04: 129958-136488 Eucalyptus grandis
Eucgr.D00017 2.0kb upstream 2.0kb upstream 2000 false Chr04: 134489-136488 Eucalyptus grandis
Eucgr.D00017 2.0kb downstream 2.0kb downstream 6531 true Chr04: 127958-134488 Eucalyptus grandis
Eucgr.D00017 2.0kb downstream 2.0kb downstream 2000 false Chr04: 127958-129957 Eucalyptus grandis
Eucgr.D00017 5.0kb upstream 5.0kb upstream 9531 true Chr04: 129958-139488 Eucalyptus grandis
Eucgr.D00017 5.0kb upstream 5.0kb upstream 5000 false Chr04: 134489-139488 Eucalyptus grandis
Eucgr.D00017 5.0kb downstream 5.0kb downstream 9531 true Chr04: 124958-134488 Eucalyptus grandis
Eucgr.D00017 5.0kb downstream 5.0kb downstream 5000 false Chr04: 124958-129957 Eucalyptus grandis
Eucgr.D00017 10.0kb upstream 10.0kb upstream 14531 true Chr04: 129958-144488 Eucalyptus grandis
Eucgr.D00017 10.0kb upstream 10.0kb upstream 10000 false Chr04: 134489-144488 Eucalyptus grandis
Eucgr.D00017 10.0kb downstream 10.0kb downstream 14531 true Chr04: 119958-134488 Eucalyptus grandis
Eucgr.D00017 10.0kb downstream 10.0kb downstream 10000 false Chr04: 119958-129957 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067996 5270 Rosid View MSA
123737460 5271 Pentapetalae View MSA
122786407 5272 Eudicot View MSA
122042851 5273 Angiosperm View MSA
121347111 5274 Embryophyte View MSA
123424099 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.9637 0.0 88.4354 High  
cufflinks 2.13328 0.0 5.97968   Low
cufflinks 17.0812 0.0 43.1532    
cufflinks 3.44423 0.0 10.6144    
cufflinks 5.14262 0.0 12.4303    
cufflinks 64.1603 0.0 187.789 High High

0 Strain