Gene : Eucgr.D00002 E. grandis v2.0
Defline:  (1 of 1) PTHR11630:SF43 - DNA REPLICATION LICENSING FACTOR MCM6 Genomic Order:  2
Name:  ? Eucgr.D00002 Secondary Identifier:  ? PAC:32050840
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00002 0.5kb upstream 0.5kb upstream 7781 true Chr04: 49081-56861 Eucalyptus grandis
Eucgr.D00002 0.5kb upstream 0.5kb upstream 500 false Chr04: 56362-56861 Eucalyptus grandis
Eucgr.D00002 0.5kb downstream 0.5kb downstream 7781 true Chr04: 48581-56361 Eucalyptus grandis
Eucgr.D00002 0.5kb downstream 0.5kb downstream 500 false Chr04: 48581-49080 Eucalyptus grandis
Eucgr.D00002 1.0kb upstream 1.0kb upstream 8281 true Chr04: 49081-57361 Eucalyptus grandis
Eucgr.D00002 1.0kb upstream 1.0kb upstream 1000 false Chr04: 56362-57361 Eucalyptus grandis
Eucgr.D00002 1.0kb downstream 1.0kb downstream 8281 true Chr04: 48081-56361 Eucalyptus grandis
Eucgr.D00002 1.0kb downstream 1.0kb downstream 1000 false Chr04: 48081-49080 Eucalyptus grandis
Eucgr.D00002 2.0kb upstream 2.0kb upstream 9281 true Chr04: 49081-58361 Eucalyptus grandis
Eucgr.D00002 2.0kb upstream 2.0kb upstream 2000 false Chr04: 56362-58361 Eucalyptus grandis
Eucgr.D00002 2.0kb downstream 2.0kb downstream 9281 true Chr04: 47081-56361 Eucalyptus grandis
Eucgr.D00002 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47081-49080 Eucalyptus grandis
Eucgr.D00002 5.0kb upstream 5.0kb upstream 12281 true Chr04: 49081-61361 Eucalyptus grandis
Eucgr.D00002 5.0kb upstream 5.0kb upstream 5000 false Chr04: 56362-61361 Eucalyptus grandis
Eucgr.D00002 5.0kb downstream 5.0kb downstream 12281 true Chr04: 44081-56361 Eucalyptus grandis
Eucgr.D00002 5.0kb downstream 5.0kb downstream 5000 false Chr04: 44081-49080 Eucalyptus grandis
Eucgr.D00002 10.0kb upstream 10.0kb upstream 17281 true Chr04: 49081-66361 Eucalyptus grandis
Eucgr.D00002 10.0kb upstream 10.0kb upstream 10000 false Chr04: 56362-66361 Eucalyptus grandis
Eucgr.D00002 10.0kb downstream 10.0kb downstream 17281 true Chr04: 39081-56361 Eucalyptus grandis
Eucgr.D00002 10.0kb downstream 10.0kb downstream 10000 false Chr04: 39081-49080 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066009 5270 Rosid View MSA
123737807 5271 Pentapetalae View MSA
122786757 5272 Eudicot View MSA
122044275 5273 Angiosperm View MSA
121345273 5274 Embryophyte View MSA
123424492 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.3766 0.0 36.2175   High
cufflinks 0.389179 0.0 1.15168 Low  
cufflinks 12.0644 0.0 26.7272    
cufflinks 0.296999 0.0 0.905669 Low Low
cufflinks 2.70424 0.0 6.57874    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain