Gene : Eucgr.F02446 E. grandis v2.0
Defline:  (1 of 4) 5.4.2.11 - Phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) / Phosphoglyceromutase Genomic Order:  2184
Name:  ? Eucgr.F02446 Secondary Identifier:  ? PAC:32036182
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis ANAEROFRUCAT-PWY Eucalyptus grandis pathologic  
Egrandis ANAGLYCOLYSIS-PWY Eucalyptus grandis pathologic  
Egrandis PWY66-399 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02446 0.5kb upstream 0.5kb upstream 5038 true Chr03: 54644781-54649818 Eucalyptus grandis
Eucgr.F02446 0.5kb upstream 0.5kb upstream 500 false Chr03: 54649319-54649818 Eucalyptus grandis
Eucgr.F02446 0.5kb downstream 0.5kb downstream 5038 true Chr03: 54644281-54649318 Eucalyptus grandis
Eucgr.F02446 0.5kb downstream 0.5kb downstream 500 false Chr03: 54644281-54644780 Eucalyptus grandis
Eucgr.F02446 1.0kb upstream 1.0kb upstream 5538 true Chr03: 54644781-54650318 Eucalyptus grandis
Eucgr.F02446 1.0kb upstream 1.0kb upstream 1000 false Chr03: 54649319-54650318 Eucalyptus grandis
Eucgr.F02446 1.0kb downstream 1.0kb downstream 5538 true Chr03: 54643781-54649318 Eucalyptus grandis
Eucgr.F02446 1.0kb downstream 1.0kb downstream 1000 false Chr03: 54643781-54644780 Eucalyptus grandis
Eucgr.F02446 2.0kb upstream 2.0kb upstream 6538 true Chr03: 54644781-54651318 Eucalyptus grandis
Eucgr.F02446 2.0kb upstream 2.0kb upstream 2000 false Chr03: 54649319-54651318 Eucalyptus grandis
Eucgr.F02446 2.0kb downstream 2.0kb downstream 6538 true Chr03: 54642781-54649318 Eucalyptus grandis
Eucgr.F02446 2.0kb downstream 2.0kb downstream 2000 false Chr03: 54642781-54644780 Eucalyptus grandis
Eucgr.F02446 5.0kb upstream 5.0kb upstream 9538 true Chr03: 54644781-54654318 Eucalyptus grandis
Eucgr.F02446 5.0kb upstream 5.0kb upstream 5000 false Chr03: 54649319-54654318 Eucalyptus grandis
Eucgr.F02446 5.0kb downstream 5.0kb downstream 9538 true Chr03: 54639781-54649318 Eucalyptus grandis
Eucgr.F02446 5.0kb downstream 5.0kb downstream 5000 false Chr03: 54639781-54644780 Eucalyptus grandis
Eucgr.F02446 10.0kb upstream 10.0kb upstream 14538 true Chr03: 54644781-54659318 Eucalyptus grandis
Eucgr.F02446 10.0kb upstream 10.0kb upstream 10000 false Chr03: 54649319-54659318 Eucalyptus grandis
Eucgr.F02446 10.0kb downstream 10.0kb downstream 14538 true Chr03: 54634781-54649318 Eucalyptus grandis
Eucgr.F02446 10.0kb downstream 10.0kb downstream 10000 false Chr03: 54634781-54644780 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065528 5270 Rosid View MSA
123752797 5271 Pentapetalae View MSA
122793128 5272 Eudicot View MSA
122042134 5273 Angiosperm View MSA
121349250 5274 Embryophyte View MSA
123428363 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.48815 0.0 4.53809   Low
cufflinks 5.03589 0.0 12.7027    
cufflinks 1.30771 0.0 4.1116   Low
cufflinks 4.7734 0.0 12.0512    
cufflinks 8.54669 0.0 22.6289   High
cufflinks 2.51636 0.0 7.13839    

0 Strain