Gene : Eucgr.C04321 E. grandis v2.0
Defline:  (1 of 5) KOG0748 - Predicted membrane proteins, contain hemolysin III domain Genomic Order:  3319
Name:  ? Eucgr.C04321 Secondary Identifier:  ? PAC:32039257
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C04321 0.5kb upstream 0.5kb upstream 3484 true Chr03: 81243217-81246700 Eucalyptus grandis
Eucgr.C04321 0.5kb upstream 0.5kb upstream 500 false Chr03: 81246201-81246700 Eucalyptus grandis
Eucgr.C04321 0.5kb downstream 0.5kb downstream 3484 true Chr03: 81242717-81246200 Eucalyptus grandis
Eucgr.C04321 0.5kb downstream 0.5kb downstream 500 false Chr03: 81242717-81243216 Eucalyptus grandis
Eucgr.C04321 1.0kb upstream 1.0kb upstream 3984 true Chr03: 81243217-81247200 Eucalyptus grandis
Eucgr.C04321 1.0kb upstream 1.0kb upstream 1000 false Chr03: 81246201-81247200 Eucalyptus grandis
Eucgr.C04321 1.0kb downstream 1.0kb downstream 3984 true Chr03: 81242217-81246200 Eucalyptus grandis
Eucgr.C04321 1.0kb downstream 1.0kb downstream 1000 false Chr03: 81242217-81243216 Eucalyptus grandis
Eucgr.C04321 2.0kb upstream 2.0kb upstream 4984 true Chr03: 81243217-81248200 Eucalyptus grandis
Eucgr.C04321 2.0kb upstream 2.0kb upstream 2000 false Chr03: 81246201-81248200 Eucalyptus grandis
Eucgr.C04321 2.0kb downstream 2.0kb downstream 4984 true Chr03: 81241217-81246200 Eucalyptus grandis
Eucgr.C04321 2.0kb downstream 2.0kb downstream 2000 false Chr03: 81241217-81243216 Eucalyptus grandis
Eucgr.C04321 5.0kb upstream 5.0kb upstream 7984 true Chr03: 81243217-81251200 Eucalyptus grandis
Eucgr.C04321 5.0kb upstream 5.0kb upstream 5000 false Chr03: 81246201-81251200 Eucalyptus grandis
Eucgr.C04321 5.0kb downstream 5.0kb downstream 7984 true Chr03: 81238217-81246200 Eucalyptus grandis
Eucgr.C04321 5.0kb downstream 5.0kb downstream 5000 false Chr03: 81238217-81243216 Eucalyptus grandis
Eucgr.C04321 10.0kb upstream 10.0kb upstream 12984 true Chr03: 81243217-81256200 Eucalyptus grandis
Eucgr.C04321 10.0kb upstream 10.0kb upstream 10000 false Chr03: 81246201-81256200 Eucalyptus grandis
Eucgr.C04321 10.0kb downstream 10.0kb downstream 12984 true Chr03: 81233217-81246200 Eucalyptus grandis
Eucgr.C04321 10.0kb downstream 10.0kb downstream 10000 false Chr03: 81233217-81243216 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066042 5270 Rosid View MSA
123752354 5271 Pentapetalae View MSA
122795335 5272 Eudicot View MSA
122047253 5273 Angiosperm View MSA
121349872 5274 Embryophyte View MSA
123428275 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.1686 0.0 28.4193    
cufflinks 3.12135 0.0 8.29358    
cufflinks 19.6108 0.0 44.3399   High
cufflinks 3.78977 0.0 9.92021    
cufflinks 0.790707 0.0 2.4457   Low
cufflinks 10.5743 0.0 24.9822    

0 Strain