Gene : Eucgr.C04264 E. grandis v2.0
Defline:  (1 of 1) PTHR14190 - SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52 Genomic Order:  3280
Name:  ? Eucgr.C04264 Secondary Identifier:  ? PAC:32036352
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C04264 0.5kb upstream 0.5kb upstream 14155 true Chr03: 80135244-80149398 Eucalyptus grandis
Eucgr.C04264 0.5kb upstream 0.5kb upstream 500 false Chr03: 80135244-80135743 Eucalyptus grandis
Eucgr.C04264 0.5kb downstream 0.5kb downstream 14155 true Chr03: 80135744-80149898 Eucalyptus grandis
Eucgr.C04264 0.5kb downstream 0.5kb downstream 500 false Chr03: 80149399-80149898 Eucalyptus grandis
Eucgr.C04264 1.0kb upstream 1.0kb upstream 14655 true Chr03: 80134744-80149398 Eucalyptus grandis
Eucgr.C04264 1.0kb upstream 1.0kb upstream 1000 false Chr03: 80134744-80135743 Eucalyptus grandis
Eucgr.C04264 1.0kb downstream 1.0kb downstream 14655 true Chr03: 80135744-80150398 Eucalyptus grandis
Eucgr.C04264 1.0kb downstream 1.0kb downstream 1000 false Chr03: 80149399-80150398 Eucalyptus grandis
Eucgr.C04264 2.0kb upstream 2.0kb upstream 15655 true Chr03: 80133744-80149398 Eucalyptus grandis
Eucgr.C04264 2.0kb upstream 2.0kb upstream 2000 false Chr03: 80133744-80135743 Eucalyptus grandis
Eucgr.C04264 2.0kb downstream 2.0kb downstream 15655 true Chr03: 80135744-80151398 Eucalyptus grandis
Eucgr.C04264 2.0kb downstream 2.0kb downstream 2000 false Chr03: 80149399-80151398 Eucalyptus grandis
Eucgr.C04264 5.0kb upstream 5.0kb upstream 18655 true Chr03: 80130744-80149398 Eucalyptus grandis
Eucgr.C04264 5.0kb upstream 5.0kb upstream 5000 false Chr03: 80130744-80135743 Eucalyptus grandis
Eucgr.C04264 5.0kb downstream 5.0kb downstream 18655 true Chr03: 80135744-80154398 Eucalyptus grandis
Eucgr.C04264 5.0kb downstream 5.0kb downstream 5000 false Chr03: 80149399-80154398 Eucalyptus grandis
Eucgr.C04264 10.0kb upstream 10.0kb upstream 23655 true Chr03: 80125744-80149398 Eucalyptus grandis
Eucgr.C04264 10.0kb upstream 10.0kb upstream 10000 false Chr03: 80125744-80135743 Eucalyptus grandis
Eucgr.C04264 10.0kb downstream 10.0kb downstream 23655 true Chr03: 80135744-80159398 Eucalyptus grandis
Eucgr.C04264 10.0kb downstream 10.0kb downstream 10000 false Chr03: 80149399-80159398 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065275 5270 Rosid View MSA
123738224 5271 Pentapetalae View MSA
122792330 5272 Eudicot View MSA
122043794 5273 Angiosperm View MSA
121345189 5274 Embryophyte View MSA
123425999 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.6716 0.0 30.2979    
cufflinks 23.308 0.0 51.7527    
cufflinks 13.5093 0.0 29.9184    
cufflinks 35.6987 0.0 80.5432   High
cufflinks 19.8895 0.0 44.0212    
cufflinks 16.8367 0.0 37.2498    

0 Strain