Gene : Eucgr.C04304 E. grandis v2.0
Defline:  (1 of 5) KOG0748 - Predicted membrane proteins, contain hemolysin III domain Genomic Order:  3308
Name:  ? Eucgr.C04304 Secondary Identifier:  ? PAC:32036822
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C04304 0.5kb upstream 0.5kb upstream 1869 true Chr03: 80847625-80849493 Eucalyptus grandis
Eucgr.C04304 0.5kb upstream 0.5kb upstream 500 false Chr03: 80848994-80849493 Eucalyptus grandis
Eucgr.C04304 0.5kb downstream 0.5kb downstream 1869 true Chr03: 80847125-80848993 Eucalyptus grandis
Eucgr.C04304 0.5kb downstream 0.5kb downstream 500 false Chr03: 80847125-80847624 Eucalyptus grandis
Eucgr.C04304 1.0kb upstream 1.0kb upstream 2369 true Chr03: 80847625-80849993 Eucalyptus grandis
Eucgr.C04304 1.0kb upstream 1.0kb upstream 1000 false Chr03: 80848994-80849993 Eucalyptus grandis
Eucgr.C04304 1.0kb downstream 1.0kb downstream 2369 true Chr03: 80846625-80848993 Eucalyptus grandis
Eucgr.C04304 1.0kb downstream 1.0kb downstream 1000 false Chr03: 80846625-80847624 Eucalyptus grandis
Eucgr.C04304 2.0kb upstream 2.0kb upstream 3369 true Chr03: 80847625-80850993 Eucalyptus grandis
Eucgr.C04304 2.0kb upstream 2.0kb upstream 2000 false Chr03: 80848994-80850993 Eucalyptus grandis
Eucgr.C04304 2.0kb downstream 2.0kb downstream 3369 true Chr03: 80845625-80848993 Eucalyptus grandis
Eucgr.C04304 2.0kb downstream 2.0kb downstream 2000 false Chr03: 80845625-80847624 Eucalyptus grandis
Eucgr.C04304 5.0kb upstream 5.0kb upstream 6369 true Chr03: 80847625-80853993 Eucalyptus grandis
Eucgr.C04304 5.0kb upstream 5.0kb upstream 5000 false Chr03: 80848994-80853993 Eucalyptus grandis
Eucgr.C04304 5.0kb downstream 5.0kb downstream 6369 true Chr03: 80842625-80848993 Eucalyptus grandis
Eucgr.C04304 5.0kb downstream 5.0kb downstream 5000 false Chr03: 80842625-80847624 Eucalyptus grandis
Eucgr.C04304 10.0kb upstream 10.0kb upstream 11369 true Chr03: 80847625-80858993 Eucalyptus grandis
Eucgr.C04304 10.0kb upstream 10.0kb upstream 10000 false Chr03: 80848994-80858993 Eucalyptus grandis
Eucgr.C04304 10.0kb downstream 10.0kb downstream 11369 true Chr03: 80837625-80848993 Eucalyptus grandis
Eucgr.C04304 10.0kb downstream 10.0kb downstream 10000 false Chr03: 80837625-80847624 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066042 5270 Rosid View MSA
123752354 5271 Pentapetalae View MSA
122795335 5272 Eudicot View MSA
122047253 5273 Angiosperm View MSA
121349872 5274 Embryophyte View MSA
123428275 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.467003 0.0 1.7352 Low  
cufflinks 0.149408 0.0 0.76279 Low  
cufflinks 1.67991E-4 0.0 0.0218447 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.897941 0.0 3.03986    
cufflinks 3.07084 0.0 9.0402    

0 Strain