Gene : Eucgr.D00664 E. grandis v2.0
Defline:  (1 of 1) PTHR11452//PTHR11452:SF36 - ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE Genomic Order:  545
Name:  ? Eucgr.D00664 Secondary Identifier:  ? PAC:32050755
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY0-1301 Eucalyptus grandis pathologic  
Egrandis PWY-6527 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00664 0.5kb upstream 0.5kb upstream 3814 true Chr04: 12329606-12333419 Eucalyptus grandis
Eucgr.D00664 0.5kb upstream 0.5kb upstream 500 false Chr04: 12329606-12330105 Eucalyptus grandis
Eucgr.D00664 0.5kb downstream 0.5kb downstream 3814 true Chr04: 12330106-12333919 Eucalyptus grandis
Eucgr.D00664 0.5kb downstream 0.5kb downstream 500 false Chr04: 12333420-12333919 Eucalyptus grandis
Eucgr.D00664 1.0kb upstream 1.0kb upstream 4314 true Chr04: 12329106-12333419 Eucalyptus grandis
Eucgr.D00664 1.0kb upstream 1.0kb upstream 1000 false Chr04: 12329106-12330105 Eucalyptus grandis
Eucgr.D00664 1.0kb downstream 1.0kb downstream 4314 true Chr04: 12330106-12334419 Eucalyptus grandis
Eucgr.D00664 1.0kb downstream 1.0kb downstream 1000 false Chr04: 12333420-12334419 Eucalyptus grandis
Eucgr.D00664 2.0kb upstream 2.0kb upstream 5314 true Chr04: 12328106-12333419 Eucalyptus grandis
Eucgr.D00664 2.0kb upstream 2.0kb upstream 2000 false Chr04: 12328106-12330105 Eucalyptus grandis
Eucgr.D00664 2.0kb downstream 2.0kb downstream 5314 true Chr04: 12330106-12335419 Eucalyptus grandis
Eucgr.D00664 2.0kb downstream 2.0kb downstream 2000 false Chr04: 12333420-12335419 Eucalyptus grandis
Eucgr.D00664 5.0kb upstream 5.0kb upstream 8314 true Chr04: 12325106-12333419 Eucalyptus grandis
Eucgr.D00664 5.0kb upstream 5.0kb upstream 5000 false Chr04: 12325106-12330105 Eucalyptus grandis
Eucgr.D00664 5.0kb downstream 5.0kb downstream 8314 true Chr04: 12330106-12338419 Eucalyptus grandis
Eucgr.D00664 5.0kb downstream 5.0kb downstream 5000 false Chr04: 12333420-12338419 Eucalyptus grandis
Eucgr.D00664 10.0kb upstream 10.0kb upstream 13314 true Chr04: 12320106-12333419 Eucalyptus grandis
Eucgr.D00664 10.0kb upstream 10.0kb upstream 10000 false Chr04: 12320106-12330105 Eucalyptus grandis
Eucgr.D00664 10.0kb downstream 10.0kb downstream 13314 true Chr04: 12330106-12343419 Eucalyptus grandis
Eucgr.D00664 10.0kb downstream 10.0kb downstream 10000 false Chr04: 12333420-12343419 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073438 5270 Rosid View MSA
123749303 5271 Pentapetalae View MSA
122796981 5272 Eudicot View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.0207 0.0 29.8201    
cufflinks 8.372 0.0 19.9129    
cufflinks 3.76921 0.0 9.6845   Low
cufflinks 3.42144 0.0 8.85875   Low
cufflinks 8.46518 0.0 20.0824    
cufflinks 21.4046 0.0 47.8281   High

0 Strain