Gene : Eucgr.D00648 E. grandis v2.0
Defline:  (1 of 9) PTHR10992//PTHR10992:SF869 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN Genomic Order:  531
Name:  ? Eucgr.D00648 Secondary Identifier:  ? PAC:32051375
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00648 0.5kb upstream 0.5kb upstream 2658 true Chr04: 11953594-11956251 Eucalyptus grandis
Eucgr.D00648 0.5kb upstream 0.5kb upstream 500 false Chr04: 11955752-11956251 Eucalyptus grandis
Eucgr.D00648 0.5kb downstream 0.5kb downstream 2658 true Chr04: 11953094-11955751 Eucalyptus grandis
Eucgr.D00648 0.5kb downstream 0.5kb downstream 500 false Chr04: 11953094-11953593 Eucalyptus grandis
Eucgr.D00648 1.0kb upstream 1.0kb upstream 3158 true Chr04: 11953594-11956751 Eucalyptus grandis
Eucgr.D00648 1.0kb upstream 1.0kb upstream 1000 false Chr04: 11955752-11956751 Eucalyptus grandis
Eucgr.D00648 1.0kb downstream 1.0kb downstream 3158 true Chr04: 11952594-11955751 Eucalyptus grandis
Eucgr.D00648 1.0kb downstream 1.0kb downstream 1000 false Chr04: 11952594-11953593 Eucalyptus grandis
Eucgr.D00648 2.0kb upstream 2.0kb upstream 4158 true Chr04: 11953594-11957751 Eucalyptus grandis
Eucgr.D00648 2.0kb upstream 2.0kb upstream 2000 false Chr04: 11955752-11957751 Eucalyptus grandis
Eucgr.D00648 2.0kb downstream 2.0kb downstream 4158 true Chr04: 11951594-11955751 Eucalyptus grandis
Eucgr.D00648 2.0kb downstream 2.0kb downstream 2000 false Chr04: 11951594-11953593 Eucalyptus grandis
Eucgr.D00648 5.0kb upstream 5.0kb upstream 7158 true Chr04: 11953594-11960751 Eucalyptus grandis
Eucgr.D00648 5.0kb upstream 5.0kb upstream 5000 false Chr04: 11955752-11960751 Eucalyptus grandis
Eucgr.D00648 5.0kb downstream 5.0kb downstream 7158 true Chr04: 11948594-11955751 Eucalyptus grandis
Eucgr.D00648 5.0kb downstream 5.0kb downstream 5000 false Chr04: 11948594-11953593 Eucalyptus grandis
Eucgr.D00648 10.0kb upstream 10.0kb upstream 12158 true Chr04: 11953594-11965751 Eucalyptus grandis
Eucgr.D00648 10.0kb upstream 10.0kb upstream 10000 false Chr04: 11955752-11965751 Eucalyptus grandis
Eucgr.D00648 10.0kb downstream 10.0kb downstream 12158 true Chr04: 11943594-11955751 Eucalyptus grandis
Eucgr.D00648 10.0kb downstream 10.0kb downstream 10000 false Chr04: 11943594-11953593 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069976 5270 Rosid View MSA
123753681 5271 Pentapetalae View MSA
122797567 5272 Eudicot View MSA
122048317 5273 Angiosperm View MSA
121350618 5274 Embryophyte View MSA
123428460 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.957748 0.0 3.0571    
cufflinks 2.49051 0.0 7.05348    
cufflinks 0.288901 0.0 1.08296 Low  
cufflinks 0.00433073 0.0 0.0904031 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.8662 0.0 5.51758    

0 Strain