Gene : Eucgr.D00657 E. grandis v2.0
Defline:  (1 of 5) 1.10.3.1 - Catechol oxidase / Tyrosinase Genomic Order:  540
Name:  ? Eucgr.D00657 Secondary Identifier:  ? PAC:32050990
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6752 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00657 0.5kb upstream 0.5kb upstream 3430 true Chr04: 12122219-12125648 Eucalyptus grandis
Eucgr.D00657 0.5kb upstream 0.5kb upstream 500 false Chr04: 12122219-12122718 Eucalyptus grandis
Eucgr.D00657 0.5kb downstream 0.5kb downstream 3430 true Chr04: 12122719-12126148 Eucalyptus grandis
Eucgr.D00657 0.5kb downstream 0.5kb downstream 500 false Chr04: 12125649-12126148 Eucalyptus grandis
Eucgr.D00657 1.0kb upstream 1.0kb upstream 3930 true Chr04: 12121719-12125648 Eucalyptus grandis
Eucgr.D00657 1.0kb upstream 1.0kb upstream 1000 false Chr04: 12121719-12122718 Eucalyptus grandis
Eucgr.D00657 1.0kb downstream 1.0kb downstream 3930 true Chr04: 12122719-12126648 Eucalyptus grandis
Eucgr.D00657 1.0kb downstream 1.0kb downstream 1000 false Chr04: 12125649-12126648 Eucalyptus grandis
Eucgr.D00657 2.0kb upstream 2.0kb upstream 4930 true Chr04: 12120719-12125648 Eucalyptus grandis
Eucgr.D00657 2.0kb upstream 2.0kb upstream 2000 false Chr04: 12120719-12122718 Eucalyptus grandis
Eucgr.D00657 2.0kb downstream 2.0kb downstream 4930 true Chr04: 12122719-12127648 Eucalyptus grandis
Eucgr.D00657 2.0kb downstream 2.0kb downstream 2000 false Chr04: 12125649-12127648 Eucalyptus grandis
Eucgr.D00657 5.0kb upstream 5.0kb upstream 7930 true Chr04: 12117719-12125648 Eucalyptus grandis
Eucgr.D00657 5.0kb upstream 5.0kb upstream 5000 false Chr04: 12117719-12122718 Eucalyptus grandis
Eucgr.D00657 5.0kb downstream 5.0kb downstream 7930 true Chr04: 12122719-12130648 Eucalyptus grandis
Eucgr.D00657 5.0kb downstream 5.0kb downstream 5000 false Chr04: 12125649-12130648 Eucalyptus grandis
Eucgr.D00657 10.0kb upstream 10.0kb upstream 12930 true Chr04: 12112719-12125648 Eucalyptus grandis
Eucgr.D00657 10.0kb upstream 10.0kb upstream 10000 false Chr04: 12112719-12122718 Eucalyptus grandis
Eucgr.D00657 10.0kb downstream 10.0kb downstream 12930 true Chr04: 12122719-12135648 Eucalyptus grandis
Eucgr.D00657 10.0kb downstream 10.0kb downstream 10000 false Chr04: 12125649-12135648 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027808 5273 Angiosperm View MSA
124070951 5270 Rosid View MSA
123751467 5271 Pentapetalae View MSA
122794188 5272 Eudicot View MSA
121350975 5274 Embryophyte View MSA
123428097 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.76955 0.0 4.66016    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.94198 0.0 13.9686   High
cufflinks 0.564771 0.0 1.68602   Low
cufflinks 3.38213 0.0 8.36353    
cufflinks 0.830347 0.0 2.34968 Low  

0 Strain