Gene : Eucgr.D00616 E. grandis v2.0
Defline:  (1 of 5) PTHR13935:SF46 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  500
Name:  ? Eucgr.D00616 Secondary Identifier:  ? PAC:32049651
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00616 0.5kb upstream 0.5kb upstream 3528 true Chr04: 11562914-11566441 Eucalyptus grandis
Eucgr.D00616 0.5kb upstream 0.5kb upstream 500 false Chr04: 11565942-11566441 Eucalyptus grandis
Eucgr.D00616 0.5kb downstream 0.5kb downstream 3528 true Chr04: 11562414-11565941 Eucalyptus grandis
Eucgr.D00616 0.5kb downstream 0.5kb downstream 500 false Chr04: 11562414-11562913 Eucalyptus grandis
Eucgr.D00616 1.0kb upstream 1.0kb upstream 4028 true Chr04: 11562914-11566941 Eucalyptus grandis
Eucgr.D00616 1.0kb upstream 1.0kb upstream 1000 false Chr04: 11565942-11566941 Eucalyptus grandis
Eucgr.D00616 1.0kb downstream 1.0kb downstream 4028 true Chr04: 11561914-11565941 Eucalyptus grandis
Eucgr.D00616 1.0kb downstream 1.0kb downstream 1000 false Chr04: 11561914-11562913 Eucalyptus grandis
Eucgr.D00616 2.0kb upstream 2.0kb upstream 5028 true Chr04: 11562914-11567941 Eucalyptus grandis
Eucgr.D00616 2.0kb upstream 2.0kb upstream 2000 false Chr04: 11565942-11567941 Eucalyptus grandis
Eucgr.D00616 2.0kb downstream 2.0kb downstream 5028 true Chr04: 11560914-11565941 Eucalyptus grandis
Eucgr.D00616 2.0kb downstream 2.0kb downstream 2000 false Chr04: 11560914-11562913 Eucalyptus grandis
Eucgr.D00616 5.0kb upstream 5.0kb upstream 8028 true Chr04: 11562914-11570941 Eucalyptus grandis
Eucgr.D00616 5.0kb upstream 5.0kb upstream 5000 false Chr04: 11565942-11570941 Eucalyptus grandis
Eucgr.D00616 5.0kb downstream 5.0kb downstream 8028 true Chr04: 11557914-11565941 Eucalyptus grandis
Eucgr.D00616 5.0kb downstream 5.0kb downstream 5000 false Chr04: 11557914-11562913 Eucalyptus grandis
Eucgr.D00616 10.0kb upstream 10.0kb upstream 13028 true Chr04: 11562914-11575941 Eucalyptus grandis
Eucgr.D00616 10.0kb upstream 10.0kb upstream 10000 false Chr04: 11565942-11575941 Eucalyptus grandis
Eucgr.D00616 10.0kb downstream 10.0kb downstream 13028 true Chr04: 11552914-11565941 Eucalyptus grandis
Eucgr.D00616 10.0kb downstream 10.0kb downstream 10000 false Chr04: 11552914-11562913 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
124073436 5270 Rosid View MSA
123745471 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.39443 0.0 4.13547    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.22484 0.0 3.67671   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.56565 0.0 4.62896    

0 Strain