Gene : Eucgr.D00635 E. grandis v2.0
Defline:  (1 of 1) PTHR19282//PTHR19282:SF221 - TETRASPANIN Genomic Order:  518
Name:  ? Eucgr.D00635 Secondary Identifier:  ? PAC:32050989
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00635 0.5kb upstream 0.5kb upstream 2963 true Chr04: 11817376-11820338 Eucalyptus grandis
Eucgr.D00635 0.5kb upstream 0.5kb upstream 500 false Chr04: 11817376-11817875 Eucalyptus grandis
Eucgr.D00635 0.5kb downstream 0.5kb downstream 2963 true Chr04: 11817876-11820838 Eucalyptus grandis
Eucgr.D00635 0.5kb downstream 0.5kb downstream 500 false Chr04: 11820339-11820838 Eucalyptus grandis
Eucgr.D00635 1.0kb upstream 1.0kb upstream 3463 true Chr04: 11816876-11820338 Eucalyptus grandis
Eucgr.D00635 1.0kb upstream 1.0kb upstream 1000 false Chr04: 11816876-11817875 Eucalyptus grandis
Eucgr.D00635 1.0kb downstream 1.0kb downstream 3463 true Chr04: 11817876-11821338 Eucalyptus grandis
Eucgr.D00635 1.0kb downstream 1.0kb downstream 1000 false Chr04: 11820339-11821338 Eucalyptus grandis
Eucgr.D00635 2.0kb upstream 2.0kb upstream 4463 true Chr04: 11815876-11820338 Eucalyptus grandis
Eucgr.D00635 2.0kb upstream 2.0kb upstream 2000 false Chr04: 11815876-11817875 Eucalyptus grandis
Eucgr.D00635 2.0kb downstream 2.0kb downstream 4463 true Chr04: 11817876-11822338 Eucalyptus grandis
Eucgr.D00635 2.0kb downstream 2.0kb downstream 2000 false Chr04: 11820339-11822338 Eucalyptus grandis
Eucgr.D00635 5.0kb upstream 5.0kb upstream 7463 true Chr04: 11812876-11820338 Eucalyptus grandis
Eucgr.D00635 5.0kb upstream 5.0kb upstream 5000 false Chr04: 11812876-11817875 Eucalyptus grandis
Eucgr.D00635 5.0kb downstream 5.0kb downstream 7463 true Chr04: 11817876-11825338 Eucalyptus grandis
Eucgr.D00635 5.0kb downstream 5.0kb downstream 5000 false Chr04: 11820339-11825338 Eucalyptus grandis
Eucgr.D00635 10.0kb upstream 10.0kb upstream 12463 true Chr04: 11807876-11820338 Eucalyptus grandis
Eucgr.D00635 10.0kb upstream 10.0kb upstream 10000 false Chr04: 11807876-11817875 Eucalyptus grandis
Eucgr.D00635 10.0kb downstream 10.0kb downstream 12463 true Chr04: 11817876-11830338 Eucalyptus grandis
Eucgr.D00635 10.0kb downstream 10.0kb downstream 10000 false Chr04: 11820339-11830338 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041111 5273 Angiosperm View MSA
124072815 5270 Rosid View MSA
123745432 5271 Pentapetalae View MSA
122787617 5272 Eudicot View MSA
121351335 5274 Embryophyte View MSA
123424447 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.05096 0.0 13.058    
cufflinks 3.11709 0.0 8.38402    
cufflinks 7.47914 0.0 18.5649    
cufflinks 15.1283 0.0 35.0553    
cufflinks 74.2067 0.0 164.815 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain