Gene : Eucgr.D00551 E. grandis v2.0
Defline:  (1 of 4) 6.6.1.1 - Magnesium chelatase / Protoporphyrin IX Mg-chelatase Genomic Order:  444
Name:  ? Eucgr.D00551 Secondary Identifier:  ? PAC:32051133
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis CHLOROPHYLL-SYN Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00551 0.5kb upstream 0.5kb upstream 3367 true Chr04: 10366219-10369585 Eucalyptus grandis
Eucgr.D00551 0.5kb upstream 0.5kb upstream 500 false Chr04: 10366219-10366718 Eucalyptus grandis
Eucgr.D00551 0.5kb downstream 0.5kb downstream 3367 true Chr04: 10366719-10370085 Eucalyptus grandis
Eucgr.D00551 0.5kb downstream 0.5kb downstream 500 false Chr04: 10369586-10370085 Eucalyptus grandis
Eucgr.D00551 1.0kb upstream 1.0kb upstream 3867 true Chr04: 10365719-10369585 Eucalyptus grandis
Eucgr.D00551 1.0kb upstream 1.0kb upstream 1000 false Chr04: 10365719-10366718 Eucalyptus grandis
Eucgr.D00551 1.0kb downstream 1.0kb downstream 3867 true Chr04: 10366719-10370585 Eucalyptus grandis
Eucgr.D00551 1.0kb downstream 1.0kb downstream 1000 false Chr04: 10369586-10370585 Eucalyptus grandis
Eucgr.D00551 2.0kb upstream 2.0kb upstream 4867 true Chr04: 10364719-10369585 Eucalyptus grandis
Eucgr.D00551 2.0kb upstream 2.0kb upstream 2000 false Chr04: 10364719-10366718 Eucalyptus grandis
Eucgr.D00551 2.0kb downstream 2.0kb downstream 4867 true Chr04: 10366719-10371585 Eucalyptus grandis
Eucgr.D00551 2.0kb downstream 2.0kb downstream 2000 false Chr04: 10369586-10371585 Eucalyptus grandis
Eucgr.D00551 5.0kb upstream 5.0kb upstream 7867 true Chr04: 10361719-10369585 Eucalyptus grandis
Eucgr.D00551 5.0kb upstream 5.0kb upstream 5000 false Chr04: 10361719-10366718 Eucalyptus grandis
Eucgr.D00551 5.0kb downstream 5.0kb downstream 7867 true Chr04: 10366719-10374585 Eucalyptus grandis
Eucgr.D00551 5.0kb downstream 5.0kb downstream 5000 false Chr04: 10369586-10374585 Eucalyptus grandis
Eucgr.D00551 10.0kb upstream 10.0kb upstream 12867 true Chr04: 10356719-10369585 Eucalyptus grandis
Eucgr.D00551 10.0kb upstream 10.0kb upstream 10000 false Chr04: 10356719-10366718 Eucalyptus grandis
Eucgr.D00551 10.0kb downstream 10.0kb downstream 12867 true Chr04: 10366719-10379585 Eucalyptus grandis
Eucgr.D00551 10.0kb downstream 10.0kb downstream 10000 false Chr04: 10369586-10379585 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026298 5273 Angiosperm View MSA
124063666 5270 Rosid View MSA
123736903 5271 Pentapetalae View MSA
122790961 5272 Eudicot View MSA
121346302 5274 Embryophyte View MSA
123426232 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.5091 0.0 89.9351 High  
cufflinks 4.98618 0.0 12.105    
cufflinks 22.8014 0.0 50.4866    
cufflinks 2.34461 0.0 6.12269   Low
cufflinks 5.69705 0.0 13.6724    
cufflinks 76.1145 0.0 173.195 High High

0 Strain