Gene : Eucgr.D00519 E. grandis v2.0
Defline:  (1 of 1) PTHR14503:SF3 - 50S RIBOSOMAL PROTEIN L34, CHLOROPLASTIC Genomic Order:  423
Name:  ? Eucgr.D00519 Secondary Identifier:  ? PAC:32049719
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00519 0.5kb upstream 0.5kb upstream 3811 true Chr04: 9674246-9678056 Eucalyptus grandis
Eucgr.D00519 0.5kb upstream 0.5kb upstream 500 false Chr04: 9677557-9678056 Eucalyptus grandis
Eucgr.D00519 0.5kb downstream 0.5kb downstream 3811 true Chr04: 9673746-9677556 Eucalyptus grandis
Eucgr.D00519 0.5kb downstream 0.5kb downstream 500 false Chr04: 9673746-9674245 Eucalyptus grandis
Eucgr.D00519 1.0kb upstream 1.0kb upstream 4311 true Chr04: 9674246-9678556 Eucalyptus grandis
Eucgr.D00519 1.0kb upstream 1.0kb upstream 1000 false Chr04: 9677557-9678556 Eucalyptus grandis
Eucgr.D00519 1.0kb downstream 1.0kb downstream 4311 true Chr04: 9673246-9677556 Eucalyptus grandis
Eucgr.D00519 1.0kb downstream 1.0kb downstream 1000 false Chr04: 9673246-9674245 Eucalyptus grandis
Eucgr.D00519 2.0kb upstream 2.0kb upstream 5311 true Chr04: 9674246-9679556 Eucalyptus grandis
Eucgr.D00519 2.0kb upstream 2.0kb upstream 2000 false Chr04: 9677557-9679556 Eucalyptus grandis
Eucgr.D00519 2.0kb downstream 2.0kb downstream 5311 true Chr04: 9672246-9677556 Eucalyptus grandis
Eucgr.D00519 2.0kb downstream 2.0kb downstream 2000 false Chr04: 9672246-9674245 Eucalyptus grandis
Eucgr.D00519 5.0kb upstream 5.0kb upstream 8311 true Chr04: 9674246-9682556 Eucalyptus grandis
Eucgr.D00519 5.0kb upstream 5.0kb upstream 5000 false Chr04: 9677557-9682556 Eucalyptus grandis
Eucgr.D00519 5.0kb downstream 5.0kb downstream 8311 true Chr04: 9669246-9677556 Eucalyptus grandis
Eucgr.D00519 5.0kb downstream 5.0kb downstream 5000 false Chr04: 9669246-9674245 Eucalyptus grandis
Eucgr.D00519 10.0kb upstream 10.0kb upstream 13311 true Chr04: 9674246-9687556 Eucalyptus grandis
Eucgr.D00519 10.0kb upstream 10.0kb upstream 10000 false Chr04: 9677557-9687556 Eucalyptus grandis
Eucgr.D00519 10.0kb downstream 10.0kb downstream 13311 true Chr04: 9664246-9677556 Eucalyptus grandis
Eucgr.D00519 10.0kb downstream 10.0kb downstream 10000 false Chr04: 9664246-9674245 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063113 5270 Rosid View MSA
123739506 5271 Pentapetalae View MSA
122792806 5272 Eudicot View MSA
122044582 5273 Angiosperm View MSA
121344313 5274 Embryophyte View MSA
123425891 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.7826 0.0 88.5274 High  
cufflinks 7.70208 0.0 21.2616    
cufflinks 19.6404 0.0 51.8409    
cufflinks 0.805581 0.0 3.33684   Low
cufflinks 3.1351 0.0 10.038    
cufflinks 79.2704 0.0 214.613 High High

0 Strain