Gene : Eucgr.D00431 E. grandis v2.0
Defline:  (1 of 1) PTHR33057:SF10 - OVATE FAMILY PROTEIN 5 Genomic Order:  348
Name:  ? Eucgr.D00431 Secondary Identifier:  ? PAC:32051222
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00431 0.5kb upstream 0.5kb upstream 1677 true Chr04: 8078638-8080314 Eucalyptus grandis
Eucgr.D00431 0.5kb upstream 0.5kb upstream 500 false Chr04: 8079815-8080314 Eucalyptus grandis
Eucgr.D00431 0.5kb downstream 0.5kb downstream 1677 true Chr04: 8078138-8079814 Eucalyptus grandis
Eucgr.D00431 0.5kb downstream 0.5kb downstream 500 false Chr04: 8078138-8078637 Eucalyptus grandis
Eucgr.D00431 1.0kb upstream 1.0kb upstream 2177 true Chr04: 8078638-8080814 Eucalyptus grandis
Eucgr.D00431 1.0kb upstream 1.0kb upstream 1000 false Chr04: 8079815-8080814 Eucalyptus grandis
Eucgr.D00431 1.0kb downstream 1.0kb downstream 2177 true Chr04: 8077638-8079814 Eucalyptus grandis
Eucgr.D00431 1.0kb downstream 1.0kb downstream 1000 false Chr04: 8077638-8078637 Eucalyptus grandis
Eucgr.D00431 2.0kb upstream 2.0kb upstream 3177 true Chr04: 8078638-8081814 Eucalyptus grandis
Eucgr.D00431 2.0kb upstream 2.0kb upstream 2000 false Chr04: 8079815-8081814 Eucalyptus grandis
Eucgr.D00431 2.0kb downstream 2.0kb downstream 3177 true Chr04: 8076638-8079814 Eucalyptus grandis
Eucgr.D00431 2.0kb downstream 2.0kb downstream 2000 false Chr04: 8076638-8078637 Eucalyptus grandis
Eucgr.D00431 5.0kb upstream 5.0kb upstream 6177 true Chr04: 8078638-8084814 Eucalyptus grandis
Eucgr.D00431 5.0kb upstream 5.0kb upstream 5000 false Chr04: 8079815-8084814 Eucalyptus grandis
Eucgr.D00431 5.0kb downstream 5.0kb downstream 6177 true Chr04: 8073638-8079814 Eucalyptus grandis
Eucgr.D00431 5.0kb downstream 5.0kb downstream 5000 false Chr04: 8073638-8078637 Eucalyptus grandis
Eucgr.D00431 10.0kb upstream 10.0kb upstream 11177 true Chr04: 8078638-8089814 Eucalyptus grandis
Eucgr.D00431 10.0kb upstream 10.0kb upstream 10000 false Chr04: 8079815-8089814 Eucalyptus grandis
Eucgr.D00431 10.0kb downstream 10.0kb downstream 11177 true Chr04: 8068638-8079814 Eucalyptus grandis
Eucgr.D00431 10.0kb downstream 10.0kb downstream 10000 false Chr04: 8068638-8078637 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050737 5270 Rosid View MSA
123750394 5271 Pentapetalae View MSA
122789866 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.74356 0.0 4.84651    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.36204 0.0 3.92175    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.371881 0.0 1.25895 Low Low
cufflinks 0.895246 0.0 2.64687    

0 Strain