Gene : Eucgr.D00344 E. grandis v2.0
Defline:  (1 of 4) PF05512 - AWPM-19-like family (AWPM-19) Genomic Order:  275
Name:  ? Eucgr.D00344 Secondary Identifier:  ? PAC:32050211
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00344 0.5kb upstream 0.5kb upstream 1651 true Chr04: 5967554-5969204 Eucalyptus grandis
Eucgr.D00344 0.5kb upstream 0.5kb upstream 500 false Chr04: 5967554-5968053 Eucalyptus grandis
Eucgr.D00344 0.5kb downstream 0.5kb downstream 1651 true Chr04: 5968054-5969704 Eucalyptus grandis
Eucgr.D00344 0.5kb downstream 0.5kb downstream 500 false Chr04: 5969205-5969704 Eucalyptus grandis
Eucgr.D00344 1.0kb upstream 1.0kb upstream 2151 true Chr04: 5967054-5969204 Eucalyptus grandis
Eucgr.D00344 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5967054-5968053 Eucalyptus grandis
Eucgr.D00344 1.0kb downstream 1.0kb downstream 2151 true Chr04: 5968054-5970204 Eucalyptus grandis
Eucgr.D00344 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5969205-5970204 Eucalyptus grandis
Eucgr.D00344 2.0kb upstream 2.0kb upstream 3151 true Chr04: 5966054-5969204 Eucalyptus grandis
Eucgr.D00344 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5966054-5968053 Eucalyptus grandis
Eucgr.D00344 2.0kb downstream 2.0kb downstream 3151 true Chr04: 5968054-5971204 Eucalyptus grandis
Eucgr.D00344 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5969205-5971204 Eucalyptus grandis
Eucgr.D00344 5.0kb upstream 5.0kb upstream 6151 true Chr04: 5963054-5969204 Eucalyptus grandis
Eucgr.D00344 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5963054-5968053 Eucalyptus grandis
Eucgr.D00344 5.0kb downstream 5.0kb downstream 6151 true Chr04: 5968054-5974204 Eucalyptus grandis
Eucgr.D00344 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5969205-5974204 Eucalyptus grandis
Eucgr.D00344 10.0kb upstream 10.0kb upstream 11151 true Chr04: 5958054-5969204 Eucalyptus grandis
Eucgr.D00344 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5958054-5968053 Eucalyptus grandis
Eucgr.D00344 10.0kb downstream 10.0kb downstream 11151 true Chr04: 5968054-5979204 Eucalyptus grandis
Eucgr.D00344 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5969205-5979204 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067384 5270 Rosid View MSA
123740214 5271 Pentapetalae View MSA
122788901 5272 Eudicot View MSA
122050396 5273 Angiosperm View MSA
121349282 5274 Embryophyte View MSA
123381254 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.89622 0.0 11.1958    
cufflinks 2.80781 0.0 8.30902    
cufflinks 3.88445 0.0 11.2628    
cufflinks 1.98337 0.0 6.21504    
cufflinks 74.2243 0.0 165.167 High High
cufflinks 3.28507 0.0 9.71259    

0 Strain