Gene : Eucgr.D00314 E. grandis v2.0
Defline:  (1 of 1) PTHR21206 - SLD5 PROTEIN Genomic Order:  246
Name:  ? Eucgr.D00314 Secondary Identifier:  ? PAC:32050569
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00314 0.5kb upstream 0.5kb upstream 4698 true Chr04: 5444693-5449390 Eucalyptus grandis
Eucgr.D00314 0.5kb upstream 0.5kb upstream 500 false Chr04: 5444693-5445192 Eucalyptus grandis
Eucgr.D00314 0.5kb downstream 0.5kb downstream 4698 true Chr04: 5445193-5449890 Eucalyptus grandis
Eucgr.D00314 0.5kb downstream 0.5kb downstream 500 false Chr04: 5449391-5449890 Eucalyptus grandis
Eucgr.D00314 1.0kb upstream 1.0kb upstream 5198 true Chr04: 5444193-5449390 Eucalyptus grandis
Eucgr.D00314 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5444193-5445192 Eucalyptus grandis
Eucgr.D00314 1.0kb downstream 1.0kb downstream 5198 true Chr04: 5445193-5450390 Eucalyptus grandis
Eucgr.D00314 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5449391-5450390 Eucalyptus grandis
Eucgr.D00314 2.0kb upstream 2.0kb upstream 6198 true Chr04: 5443193-5449390 Eucalyptus grandis
Eucgr.D00314 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5443193-5445192 Eucalyptus grandis
Eucgr.D00314 2.0kb downstream 2.0kb downstream 6198 true Chr04: 5445193-5451390 Eucalyptus grandis
Eucgr.D00314 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5449391-5451390 Eucalyptus grandis
Eucgr.D00314 5.0kb upstream 5.0kb upstream 9198 true Chr04: 5440193-5449390 Eucalyptus grandis
Eucgr.D00314 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5440193-5445192 Eucalyptus grandis
Eucgr.D00314 5.0kb downstream 5.0kb downstream 9198 true Chr04: 5445193-5454390 Eucalyptus grandis
Eucgr.D00314 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5449391-5454390 Eucalyptus grandis
Eucgr.D00314 10.0kb upstream 10.0kb upstream 14198 true Chr04: 5435193-5449390 Eucalyptus grandis
Eucgr.D00314 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5435193-5445192 Eucalyptus grandis
Eucgr.D00314 10.0kb downstream 10.0kb downstream 14198 true Chr04: 5445193-5459390 Eucalyptus grandis
Eucgr.D00314 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5449391-5459390 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063241 5270 Rosid View MSA
123739150 5271 Pentapetalae View MSA
122785984 5272 Eudicot View MSA
122043096 5273 Angiosperm View MSA
121344568 5274 Embryophyte View MSA
123424652 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.04551 0.0 15.5632    
cufflinks 3.09785 0.0 8.51882    
cufflinks 4.08157 0.0 10.9171    
cufflinks 8.71062 0.0 21.5854   High
cufflinks 4.7857 0.0 12.6117    
cufflinks 0.766087 0.0 2.46379 Low Low

0 Strain