Gene : Eucgr.D00320 E. grandis v2.0
Defline:  (1 of 5) PTHR21649:SF26 - CHLOROPHYLL A-B BINDING PROTEIN 1, CHLOROPLASTIC-RELATED Genomic Order:  252
Name:  ? Eucgr.D00320 Secondary Identifier:  ? PAC:32051318
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00320 0.5kb upstream 0.5kb upstream 1571 true Chr04: 5509680-5511250 Eucalyptus grandis
Eucgr.D00320 0.5kb upstream 0.5kb upstream 500 false Chr04: 5510751-5511250 Eucalyptus grandis
Eucgr.D00320 0.5kb downstream 0.5kb downstream 1571 true Chr04: 5509180-5510750 Eucalyptus grandis
Eucgr.D00320 0.5kb downstream 0.5kb downstream 500 false Chr04: 5509180-5509679 Eucalyptus grandis
Eucgr.D00320 1.0kb upstream 1.0kb upstream 2071 true Chr04: 5509680-5511750 Eucalyptus grandis
Eucgr.D00320 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5510751-5511750 Eucalyptus grandis
Eucgr.D00320 1.0kb downstream 1.0kb downstream 2071 true Chr04: 5508680-5510750 Eucalyptus grandis
Eucgr.D00320 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5508680-5509679 Eucalyptus grandis
Eucgr.D00320 2.0kb upstream 2.0kb upstream 3071 true Chr04: 5509680-5512750 Eucalyptus grandis
Eucgr.D00320 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5510751-5512750 Eucalyptus grandis
Eucgr.D00320 2.0kb downstream 2.0kb downstream 3071 true Chr04: 5507680-5510750 Eucalyptus grandis
Eucgr.D00320 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5507680-5509679 Eucalyptus grandis
Eucgr.D00320 5.0kb upstream 5.0kb upstream 6071 true Chr04: 5509680-5515750 Eucalyptus grandis
Eucgr.D00320 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5510751-5515750 Eucalyptus grandis
Eucgr.D00320 5.0kb downstream 5.0kb downstream 6071 true Chr04: 5504680-5510750 Eucalyptus grandis
Eucgr.D00320 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5504680-5509679 Eucalyptus grandis
Eucgr.D00320 10.0kb upstream 10.0kb upstream 11071 true Chr04: 5509680-5520750 Eucalyptus grandis
Eucgr.D00320 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5510751-5520750 Eucalyptus grandis
Eucgr.D00320 10.0kb downstream 10.0kb downstream 11071 true Chr04: 5499680-5510750 Eucalyptus grandis
Eucgr.D00320 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5499680-5509679 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072480 5270 Rosid View MSA
123751711 5271 Pentapetalae View MSA
122794402 5272 Eudicot View MSA
122050341 5273 Angiosperm View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.48024 0.0 4.38888    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0798775 0.0 0.4408 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.34878 0.0 13.7807    

0 Strain